Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0520 ATGACACAACAACCGGACTTCAGTTGGATGGTTCCCATTGAAGTGATGCTGGGTGCCCTCTACCACGGACAAGTCCAAGCCTGCAGCATCTCAAGCGTCACGGACGAGCTTCGAAGCCCGAACGAGGCGGCTTTCAAGCCAAAGGAGGTCTCCATAGGACCCTTGCACAGAGGAACCACGAGGCACGTGCAGCTAATGGAAGAGACAAAATGGCATTACATGCGCGAATTTCTCGACAGAAGAGGCACGCAGGAGCAGAACAGAAGATCGGAGCGGAGGCTCAGAGAGTGTGGCACCGATATCCTCAAGCTGGATAAGATAATCATGGCATGCTATGGAGGTAACATCAGATCAGAACCGCAAGAGTTGGCTAAAATAATGATTGTAGATGGTTGTTTTCTATTGGAACTCCTTATCAGGCTTGGTGATTTTATATGTAACAATAGTAGTAGTTATGCAAATGACCCTATACTGAAAAATGAGGAGAAGATGGTGTCTGTTCTGAATGATATCACATTGCTTGAGAACCAAATTCCATTCATTGTTCTCAAGAAGTTGTATAGGAAGGTCTTTCCCGATGGCAGTGACATCAACAACGATAACCGGGTTGCTGATATCGTTTGCAAAGCTTTTGGTTACACTGAGGTGAAAGCCCCGGTCCACATACTTCACTTGATGCATTTGTCCACAGTTGAACAGACTCAGCAAGAGGGTAAACGCGTGGAGCAAGAACTATTGCGCTGCGCCACGAGACTTCAAGCTGCAGGAGTAGAAATTAAAGCTGCAAACACCATTGCTCGCCATAAGTTGGTGGATTGGTTCAATTTTGAGATAAGTTTCAGTGACAGCGTGTTGCGGATTCCACCGCTGTATGTTAAGGACACTACAGAAGTGAGGTGGAGGAATTTGATCGCGTGGGAGCAGAGCAGAATTTGGATCAGATGTAAATACACTTCGTATGCATTGTTCTTTCAAGGTTTGGTTTGTTGTAAGCATGACATTGAGCTGCTTGAGAAGAATGGGGTGATAGTGAACAAGGCCGGGAAGAGCACTGATGAACTGCTGGATCTGTTTCGAACGATTGCGAAGGGAGCAGAGTACATGGATTCGAGCTATAGCGAAATTTGTGCGAGGTTGAACATGTACAACAGGGGAAAAATCACAACTGCATTTCAAGGATTGCCTGTAGTCACTTGGCACAAGTGCAGACATGTTTTGCAGATCATTGTTTACTATTGGGGAAACTGGTACAGAATTTTGATACGCGATCATATTCCCACGGTGTGGAAATTCATAGGAGTGTTGGCAGCTGCTGCACTTCTTGTTCTCACAATTATGCAAACCTATTACTCATCCCGCAATAAAGACTGA 1371 0.4551 MTQQPDFSWMVPIEVMLGALYHGQVQACSISSVTDELRSPNEAAFKPKEVSIGPLHRGTTRHVQLMEETKWHYMREFLDRRGTQEQNRRSERRLRECGTDILKLDKIIMACYGGNIRSEPQELAKIMIVDGCFLLELLIRLGDFICNNSSSYANDPILKNEEKMVSVLNDITLLENQIPFIVLKKLYRKVFPDGSDINNDNRVADIVCKAFGYTEVKAPVHILHLMHLSTVEQTQQEGKRVEQELLRCATRLQAAGVEIKAANTIARHKLVDWFNFEISFSDSVLRIPPLYVKDTTEVRWRNLIAWEQSRIWIRCKYTSYALFFQGLVCCKHDIELLEKNGVIVNKAGKSTDELLDLFRTIAKGAEYMDSSYSEICARLNMYNRGKITTAFQGLPVVTWHKCRHVLQIIVYYWGNWYRILIRDHIPTVWKFIGVLAAAALLVLTIMQTYYSSRNKD* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0520 456 Pfam Plant protein of unknown function 30 443 IPR004158 -
Gso3g0520 456 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 2 455 IPR004158 -
Gso3g0520 456 PANTHER DUF247 DOMAIN PROTEIN 2 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0520 Gso-Chr3 10566490 10567860 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0520 - - gmx:102665561 913.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g0520 3 10566490 10567860 Gso3g0520 3 10566490 10567860 ECH
Gso1g0967 1 39563305 39564990 Gso3g0520 3 10566490 10567860 GST
Gso7g1244 7 17758742 17760112 Gso3g0520 3 10566490 10567860 PCT
Gso3g0520 3 10566490 10567860 Gso7g1244 7 17758742 17760112 PCT