Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0519 ATGGCGTCTCTACTGCTAGCATCACCTCCTCCACTCTCCGTTCAATTGCACAGTTCCACCTCTCACCTTTCCTTCTCTCACTCCCAAACTCTCTCTTCACCACTCTCCACTTCCTTCGCTTCTCTCTCGGCCTCTGCAACCTCCACTCTTTCCCCAACCCCTTCTGTGTACTGTGGCAGAGGGGACCGGAAAACTGCCAAGGGAAAGCGCTTCGCCCATTCATTTGGAAATGCGAGGCCAAAGGACAAGAAGAAGGGTAGAGGACCACCAAGGCCTTATGCTCCACCGGCACCTTCCAAGAAAGACAAGTTCGAAGATAATGAGGTGGTGAAGATTGAAATCGACGAGTCCCTTTTCTCGGGTTGA 366 0.5219 MASLLLASPPPLSVQLHSSTSHLSFSHSQTLSSPLSTSFASLSASATSTLSPTPSVYCGRGDRKTAKGKRFAHSFGNARPKDKKKGRGPPRPYAPPAPSKKDKFEDNEVVKIEIDESLFSG* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0519 121 Pfam Ribosomal protein S31e 1 102 IPR030826 GO:0005840
Gso3g0519 121 MobiDBLite consensus disorder prediction 12 55 - -
Gso3g0519 121 MobiDBLite consensus disorder prediction 62 89 - -
Gso3g0519 121 PANTHER 30S RIBOSOMAL PROTEIN S31, CHLOROPLASTIC 1 120 - -
Gso3g0519 121 MobiDBLite consensus disorder prediction 1 107 - -
Gso3g0519 121 TIGRFAM ribo_THX: ribosomal small subunit protein bTHX 59 83 IPR030826 GO:0005840
Gso3g0519 121 PANTHER 30S RIBOSOMAL PROTEIN S31, CHLOROPLASTIC 1 120 IPR044695 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0519 Gso-Chr3 10452470 10453310 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0519 K19033 - gmx:100805197 149.828
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g0519 3 10452470 10453310 Gso3g0519 3 10452470 10453310 ECH
Gso1g0969 1 39640959 39641812 Gso3g0519 3 10452470 10453310 GST