Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0472 ATGGTAGGACCAGTGAGGCCTCAATTTGTGTTGTTTGGTTCGTCCATAGTTGAGTTCAGTTATAGTGATGAAGGTTGGGGAGCTATTCTTGCCAACTTGTATGCTCGAAAGGCAGATATAGTTTTGCGAGGATACGCTGGTTGGAATTCAAGGCGTGCTCTTCAGAATCTGGATAAAATATTTCCCAAGGATGCCACTGATCAACCATCACTGATAATTGTGTACTTTGGTGGTAATGATTCTATGCATCCACATCCATCTGGCCTTAGCCCTCATGTACCTCTCCAAGAATACATTGAAAATATGAAGAAGATTGCTATCCATCTCAAGAGCCTTTCAAAGAAGACTCGTATAATATTTCTCAGTTCCCCTCCCATCAATGAGGTGCAAATGCATGAAACTCTCAGTGATCTATTGGGGCCACTAAGAAGGACAAATGAAGCTTGTCGAACATACTCGGAAGCATGTTTGGAGCTATGCCACGAGATGAATGTGAAAGCCATTGATCTCTGGTCTGCACTCCGGCAAAGGCATGACTGGTTAGATGTTTGCTTTACGGATGGAATTCATTTGTCAAATGAGGGAAGCAAGATAGTGGCAAAAGAGATATTGAAAGTCCTCAGAGAAGCAGACTGGGAACCTAGTCTGGACTGGAAGTCAATGCCAGTTGAGTTTGCAGAAGATTCACCATATGAACCAATTGGTGCGGATGAAAACACTCATATAGATGTCTCTAACTGGAACAACATCCAGGGAAAGTCTCAACTGGAAATGAGTAATTGCGCATTGACCAAGGGATTTAGCTCAGTTGATTAA 816 0.4265 MVGPVRPQFVLFGSSIVEFSYSDEGWGAILANLYARKADIVLRGYAGWNSRRALQNLDKIFPKDATDQPSLIIVYFGGNDSMHPHPSGLSPHVPLQEYIENMKKIAIHLKSLSKKTRIIFLSSPPINEVQMHETLSDLLGPLRRTNEACRTYSEACLELCHEMNVKAIDLWSALRQRHDWLDVCFTDGIHLSNEGSKIVAKEILKVLREADWEPSLDWKSMPVEFAEDSPYEPIGADENTHIDVSNWNNIQGKSQLEMSNCALTKGFSSVD* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0472 271 Coils Coil 95 115 - -
Gso3g0472 271 SUPERFAMILY SGNH hydrolase 7 210 - -
Gso3g0472 271 Gene3D SGNH hydrolase 6 237 IPR036514 -
Gso3g0472 271 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 249 - -
Gso3g0472 271 PANTHER ISOAMYL ACETATE-HYDROLYZING ESTERASE 1 1 249 IPR045136 -
Gso3g0472 271 CDD Isoamyl_acetate_hydrolase_like 8 207 - -
Gso3g0472 271 Pfam GDSL-like Lipase/Acylhydrolase family 11 197 IPR013830 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0472 Gso-Chr3 8497130 8500608 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0472 K23978 - gmx:100796512 555.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g0472 3 8497130 8500608 Gso3g0472 3 8497130 8500608 ECH
Gso7g1271 7 18087121 18096654 Gso3g0472 3 8497130 8500608 PCT
Gso3g0472 3 8497130 8500608 Gso7g1271 7 18087121 18096654 PCT