Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0468 ATGGTCGGAAAAACAATGTCCATGGCGGCGACTTCCCGCGAAAAACTGGCGAGTCTCGTGAACGCCGCCAAGCTGGCCATCGACATCCCTTCGAAGCTAGAATCGCTGCGCCAACTCCGCCACGAACTTCCCCCCGAAGACCCCGTTCTCCTCACCGAGTTCCTCCCCTCGCTCTTCCTCTTCCACTCCGATCGCTTCGGCCCCGTTCGCAAATTCCTCACCGAGATGCTTGGGGAGATTGGATTGAAGAACACAGAGTTCTTGTCCAACATTGTGCCTGTGCTTATTGATTTATTGGATGATGACACGCCGGCGGTTGTTCGCCAAGTTCTACTGTGCGGAACTGACTTGTTTCGCGCCACTCTTGAGAAAATTGTGGTTCAGGGTCTATACTCTAGTGATTTAGATGGTGCCCTTGAATCTGCTTGGGCATGGATGCTTAAATTCAAAGACAAAGTGTACTCAATAGCTTTTCAACATGGAAGTGGTGGCGCAAAGCTGCTGGCACTGAAGTTTGTTGAGGCAGTTATTCGTCTTTACACACCTGATCCCAATGGTTCCTCAGAGCCCACTTCTCATCAAGGAAGGCCTGTGGAATTTAATATATTATGGCTCAGGCGGGGTCATCCTGTACTTAACATTGGAGATTTGAAAATTGAAGCCAGCCATCGTTTGGGTCTCTTGCTTGATCAACTCAGATTTCCAACTGTGAAGTCCCTTAGTAACTCAGTAATCATTGTGCTGATTAAAAGTCTATCAGCCATTGCATTTGACAGGCCTGCATTCTATGGCCGCATCTTGCCAGTTTTGCTCAGTTTGGAACCTTCCAGCTCTGTTGTTAATGGGGTCTGTGTATCAGCTACACATTTTGCTTTGAAGAATGCCTTTGTTACTTGCTCGAAATGTACACATCCAAGTGCTGCTCCGTGGAGAGATCGTTTGGCAGAGGCCTTGAAGGAAATGCAGTCAGAAGGAAAGGCAGATCGGGTGTTCCACCTAATCTCTGCTAGTAATGGAACCATAGAGAGAGAGAAAGATGATCAACCTGTTATCAAGGAAGAGGAACCTGCAACAAATTCTGGCGATTCAGTGCAGAATAATTTGGCAAGAAAACGATCAGGATCACAAATTGGAGGTGATTTAGCTGAAGATGAAGAAACTCCTGGAAAACGGGTCAGGACAACTGTTGTTGCTTTGGAAGAGCCTAAGGAGTTAGATGAATGTACCACTACCTACTCTCAGGATGAGACTCCAACTGTACCAACATCTTCAAAAGGAGATGTGGATAATGGGCCTGTACGGCAACTTGTTGCCACATTTGGTGCTTTGATTGCTCAAGGTGAAAGAGCTGTTGGACATTTGGAAATTCTCATCTCAAGTATTTCTGCTGACTTGCTAGCTGAGGTGGTGATGGCAAATATGCAAAACCTACCTCCGAATTACCCTAATGCTGAAGGAAATGATGAACAGCTGCAAGACATTAGTATGATTGGTTCTGATGACAAGGCTAAATATCCACCATCATTTGTAGCTGCTGTTATGTCACTTTCTAGTACTTTCCCGCCAATAGCTTCCCTTCTTGATGCACATCAATCAGTGTCCAATGAGAAGTCACAAGTGGAGGAAGAAATTTCTGCAACTGCTGCAAATAGTGGTGCTGTGGATTCTGGCATGAATATTGAATCTGAAAATATACCATCGCCTATTGATTTTCCATCTTCTGATGCCAGTATACCTGGAGTAGAGAATGGCTGCACAACTATGCCTCCTGACATCCATGATGTTGGAAACTCAGAGAGTGGAATCCCTGGCCTAGATTCTTTTGGTCGTAGTGATTCTGTGTCACAAACTTCTGCTCCTTCCTTGTTGGTTTCCACTGAAACATGCCTAGAAGATGGCAGTCAAGAGCAGGTTACAAGTTTGGATCAGAGGTCACCTCTGAACGTAGCTCCATCAATATCAACAGATAGGTCTGAGGAGCTGAGCCCAAAAGCGGCTGTTAGAGATGTCAATAGCTTGGTGTCCTCAACAGCTACTTCAGTTGTGCCTCCCCGATTAGTCTTGCCAAAGATGATTGCTCCTGTTGTTGACCTTGAAGATGAACAAAAGGATCATTTGCAAAAGTCATGTTTTATGCGTATTATTGATGCATATAAGCAAATAGCTGTAGCTGGAGGCACCAACATTCGTTTTTCGATACTTGCTTATTTAGGAGTTGAGTTTCCCTTGGAATTAGACCCGTGGAAACTATTACAGAAGCATATTTTGATTGATTACATTAGTCATGAGGGACATGAGTTGACATTGCGTGTCCTCTACAGATTATTTGGTGAGGCTGAAGAGGAGCCTGACTTCTTTTCTTCCACAACAGCAGCTTCTGTATATGAAAATTTCCTCCTTACAGTGGCAGAAGCACTTAGAGATTCCTTTCCACCTTCAGATAAATCATTAAGTAAATTGCTTGGTGAATCTCCTTATTTACCAAAATCAGTTCTGAAAATTTTAGAAAACATGTGTTCTCCTGGAAATGGGGATAAAGGTGAAAAGGAGTTGCACTCACTGAATGCAGATAGAGTTACTCAAGGTCTAAGTACTGTATGGAGTTTGATTCTTCTAAGGCCTCCCATTCGAGATACTTGCTTACAAATTGCTCTACAGAGTGCAGTGCATCATCTGGAAGAAGTGCGTATGAAGGCGATACGTCTGGTGGCAAATAAGCTTTATCCTTTGTCATCCATTTCTAAGCAAATAGAAGATTTTGCAAAGGAAATGCTTTTCTCAGTGATGAGTGGGGATGCATCTGAAGCTACTGATATTGAAGGTTCCATTGCTGATTCAGAAAAGGGACCTGATGTTGAGAAGGTTCCAAACGAACAATCATCATTGAGTGGCAGCACTAAAGATGTCACCTCAGATAATCGTCAATCATGCACATCTGAGAGTGTCTCACCAGATTCAGTTTCTGAGGCTCAGAGGTGCATGTCATTGTATTTTGCTTTGTGTACAAAGAAACATTCTCTCTTTCGCCAAATATTTGTCATCTATAGAAGTACATCAAAGGCAGTGAAGCAGGCAGTACATCGCCAAATTCCAATACTAGTACGTACTATGGGCTCATCTTCAGATCTCCTTGAAATTATTTCAGATCCCCCAAATGGAAGCGAGAATCTTCTAATGCAGGTATTGCAAACACTTACAGATGGTACGATCCCTTCTAAGGATTTAATATGTACTGTGAAAAGGTTGCATGATTCAAAACTCAAGGATGCAGAGTTTCTTATTCCGATATTACCATTCCTATCAAATGATGAGGTAATGCCCATTTTTTCTCACATTGTGAATCTTCCTTTAGAGAAGTTCCAAGCAGCACTTGGGCGCATATTACAGGGATCATCACAATCAGGTCCAGTTCTTACTCCGGCTGAAGTTTTAATTGCAATTCATGGAATTGATCCTGAAAAGGACGGAATTGCCTTGAAAAAGGTCACAGACGCATGCAATGCTTGCTTTGAGCAGCGGCAAACTTTTACTCAAGAAGTTCTTGCCAGAGTTTTGAATCAGTTGGTTGAGCAGATTCCTCCTCCTTTACTGTTCATGCGTACTGTATTACAAGCAATTGGTGCTTTTCCAACACTGGTGGACTTTATAATGGGGATTCTTTCTCGCCTTGTGACGAAGCAGATATGGAAATACCCTAAGTTGTGGGTGGGATTCTTGAAGTGTGTGCAGTTGACAAAACCACAGTCATTTGGCATTTTGCTTCAGCTGCCTCCAGCACAATTGGAAAATGCATTAAATAGAATTGCAGCCTTGAAGGCACCATTGATTGCGCATGCAAGCCAGCCAGATATACAATCTAAACTTCCGAGGGCTGTGCTGGTTGTTCTGGGACTTGCTTCCGATTCTCAGGTTTCAAGTCAAGCACAAACTAGTCAGACACAAACTAGTCAGACACAGACTAGTCAAACACAGACTACTCAGACACAAACTAGTCAAACACAGACTGGTGAGACAAGCAGCTCAGACAAGGACACAGCGACAGAAAAATCAAAGGAATCGTCTACAGCCAGCTAA 4074 0.4347 MVGKTMSMAATSREKLASLVNAAKLAIDIPSKLESLRQLRHELPPEDPVLLTEFLPSLFLFHSDRFGPVRKFLTEMLGEIGLKNTEFLSNIVPVLIDLLDDDTPAVVRQVLLCGTDLFRATLEKIVVQGLYSSDLDGALESAWAWMLKFKDKVYSIAFQHGSGGAKLLALKFVEAVIRLYTPDPNGSSEPTSHQGRPVEFNILWLRRGHPVLNIGDLKIEASHRLGLLLDQLRFPTVKSLSNSVIIVLIKSLSAIAFDRPAFYGRILPVLLSLEPSSSVVNGVCVSATHFALKNAFVTCSKCTHPSAAPWRDRLAEALKEMQSEGKADRVFHLISASNGTIEREKDDQPVIKEEEPATNSGDSVQNNLARKRSGSQIGGDLAEDEETPGKRVRTTVVALEEPKELDECTTTYSQDETPTVPTSSKGDVDNGPVRQLVATFGALIAQGERAVGHLEILISSISADLLAEVVMANMQNLPPNYPNAEGNDEQLQDISMIGSDDKAKYPPSFVAAVMSLSSTFPPIASLLDAHQSVSNEKSQVEEEISATAANSGAVDSGMNIESENIPSPIDFPSSDASIPGVENGCTTMPPDIHDVGNSESGIPGLDSFGRSDSVSQTSAPSLLVSTETCLEDGSQEQVTSLDQRSPLNVAPSISTDRSEELSPKAAVRDVNSLVSSTATSVVPPRLVLPKMIAPVVDLEDEQKDHLQKSCFMRIIDAYKQIAVAGGTNIRFSILAYLGVEFPLELDPWKLLQKHILIDYISHEGHELTLRVLYRLFGEAEEEPDFFSSTTAASVYENFLLTVAEALRDSFPPSDKSLSKLLGESPYLPKSVLKILENMCSPGNGDKGEKELHSLNADRVTQGLSTVWSLILLRPPIRDTCLQIALQSAVHHLEEVRMKAIRLVANKLYPLSSISKQIEDFAKEMLFSVMSGDASEATDIEGSIADSEKGPDVEKVPNEQSSLSGSTKDVTSDNRQSCTSESVSPDSVSEAQRCMSLYFALCTKKHSLFRQIFVIYRSTSKAVKQAVHRQIPILVRTMGSSSDLLEIISDPPNGSENLLMQVLQTLTDGTIPSKDLICTVKRLHDSKLKDAEFLIPILPFLSNDEVMPIFSHIVNLPLEKFQAALGRILQGSSQSGPVLTPAEVLIAIHGIDPEKDGIALKKVTDACNACFEQRQTFTQEVLARVLNQLVEQIPPPLLFMRTVLQAIGAFPTLVDFIMGILSRLVTKQIWKYPKLWVGFLKCVQLTKPQSFGILLQLPPAQLENALNRIAALKAPLIAHASQPDIQSKLPRAVLVVLGLASDSQVSSQAQTSQTQTSQTQTSQTQTTQTQTSQTQTGETSSSDKDTATEKSKESSTAS* 1358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0468 1357 SUPERFAMILY ARM repeat 34 1225 IPR016024 -
Gso3g0468 1357 MobiDBLite consensus disorder prediction 1306 1341 - -
Gso3g0468 1357 MobiDBLite consensus disorder prediction 341 394 - -
Gso3g0468 1357 Gene3D - 2 347 IPR011989 -
Gso3g0468 1357 MobiDBLite consensus disorder prediction 411 428 - -
Gso3g0468 1357 MobiDBLite consensus disorder prediction 943 984 - -
Gso3g0468 1357 Pfam Symplekin/PTA1 N-terminal 104 323 IPR032460 -
Gso3g0468 1357 MobiDBLite consensus disorder prediction 633 659 - -
Gso3g0468 1357 MobiDBLite consensus disorder prediction 406 428 - -
Gso3g0468 1357 MobiDBLite consensus disorder prediction 633 661 - -
Gso3g0468 1357 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 1 1240 - -
Gso3g0468 1357 MobiDBLite consensus disorder prediction 1306 1357 - -
Gso3g0468 1357 Coils Coil 523 543 - -
Gso3g0468 1357 PANTHER SYMPLEKIN/PTA1-RELATED 1 1240 - -
Gso3g0468 1357 Pfam Symplekin tight junction protein C terminal 1089 1267 IPR022075 -
Gso3g0468 1357 MobiDBLite consensus disorder prediction 377 394 - -
Gso3g0468 1357 MobiDBLite consensus disorder prediction 956 984 - -
Gso3g0468 1357 MobiDBLite consensus disorder prediction 358 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0468 Gso-Chr3 8412069 8427968 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0468 K06100 - gmx:100779360 2537.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g0468 3 8412069 8427968 Gso3g0468 3 8412069 8427968 ECH