Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0462 ATGACGGCATGCCAAGATTGGCCAGAGCCAGTGATTCGAGTCCAAGCCTTGGCTGCAAGTGGCTTAGCCACAATCCCCGAACGTTTCATAAAGCCTAAGTCCCAAAGACCCACTAATAGTAACAATTATGCTCCAAAGACCAATTCCTCTCAAATTGGTCATCATAAGAACAATACCACCAACAGCAACATCCCAGTGATTGACATGAAGCACATCTACGGTGGTGACGAGGGAAAGAGGGCTGAGACACTCCGGCTCGTGTCGGAGGCGTGCCAAGAATGGGGTTTTTTCCAGGTGGTGAACCATGGAGTGAGCCATGAGTTGATGAAGGGGGCAAGGGAGGTGTGGAGGGAGTTCTTTCACCAGCCACTTGATGTGAAAGAGGTGTATGCTAATACACCCCTCACTTATGAAGGGTATGGAAGCAGGTTGGGAGTGAAAAAAGGGGCCATTTTGGATTGGAGTGATTACTTCTTTCTCCATTACATGCCTTGTTCCCTAAGGGACCAAGCCAAGTGGCCTGCCCTCCCAACATCCTTAAGGAGCATCATCTCTGAATATGGTGAACAAATTGTTAAGCTAGGAGGAAGGATACTTGAGATAATGTCAATAAATCTTGGCCTTAGAGAGGATTTTCTCCTAAATGCATTTGGTGGGGAAAATGACCTTGGTGCTTGCTTGAGGGTGAATTTCTACCCTAAGTGCCCACAGCCTGACCTCACTCTTGGACTTTCCTCTCACTCAGATCCTGGTGGCATGACCATTCTTCTCCCTGATGAAAATGTATCAGGACTTCAAGTACGCAGAGGAGAAGATTGGGTCACTGTTAAGCCAGTCCCAAATGCTTTCATCATCAACATGGGTGACCAAATTCAGGTGCTGAGCAATGCAACTTACAAGAGTATAGAGCACAGGGTGATCGTGAACTCAGACAAAGATCGCGTTTCATTGGCCTTTTTCTATAACCCCAGGAGCGATATACCGATCCAACCAGCCAAGGAGCTTGTGACTAAGGATAGGCCAGCACTATACCCACCAATGACATTTGATGAGTATAGACTTTACATTAGGACAAGAGGACCAAGTGGAAAAGCTCAAGTTGAATCTTTGACTTCCAAATGA 1122 0.4661 MTACQDWPEPVIRVQALAASGLATIPERFIKPKSQRPTNSNNYAPKTNSSQIGHHKNNTTNSNIPVIDMKHIYGGDEGKRAETLRLVSEACQEWGFFQVVNHGVSHELMKGAREVWREFFHQPLDVKEVYANTPLTYEGYGSRLGVKKGAILDWSDYFFLHYMPCSLRDQAKWPALPTSLRSIISEYGEQIVKLGGRILEIMSINLGLREDFLLNAFGGENDLGACLRVNFYPKCPQPDLTLGLSSHSDPGGMTILLPDENVSGLQVRRGEDWVTVKPVPNAFIINMGDQIQVLSNATYKSIEHRVIVNSDKDRVSLAFFYNPRSDIPIQPAKELVTKDRPALYPPMTFDEYRLYIRTRGPSGKAQVESLTSK* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0462 373 MobiDBLite consensus disorder prediction 33 63 - -
Gso3g0462 373 Pfam 2OG-Fe(II) oxygenase superfamily 225 323 IPR044861 -
Gso3g0462 373 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 3 368 - -
Gso3g0462 373 SUPERFAMILY Clavaminate synthase-like 10 358 - -
Gso3g0462 373 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 222 323 IPR005123 -
Gso3g0462 373 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE 3 368 - -
Gso3g0462 373 Pfam non-haem dioxygenase in morphine synthesis N-terminal 64 174 IPR026992 -
Gso3g0462 373 Gene3D - 9 358 IPR027443 -
Gso3g0462 373 MobiDBLite consensus disorder prediction 28 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0462 Gso-Chr3 8246869 8251054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0462 14 370 Glycosyltransferase AT5G59530 30.685 2.49e-49 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0462 - - gmx:100809662 767.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g0462 3 8246869 8251054 Gso3g0462 3 8246869 8251054 ECH