Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0268 ATGGCTCACCACCAACTCATCGACACCCTCACCTCTCACATCTCACTCTACCATTCCCAATCCCCAAACCCTAACCCCAACCCTAACCCTAACCCTCGATCATCCATTTTGAAATGGTTTTCTTCTCTTTCCATTCACCACCGCCAGGCTCATTTAACAATCGTGGATGCGAATTTCGTTCAGATCCTTCTCCAGATGCTCGCGAAGCTCCGATCTCACGGCCACGGCTCCTTCATCCTCCTCCCTGATCTGCCCTCGCGCGACAACCTCCCCACCCTCTGCTTCAAGAAGTCCCGCGGCCTCCTCGCCCGCGTCGCTGACTCGGACGCCGCTGGGCGGGCCGTCTTCGAGTCCTCCCGCCTGTTTGACTCGCGCGAGGGCGAGGAGGCCGCCATTGCCACGCTGCCCTCGGCCAGGCGGCTCGACGCGCTGGCGCTTGCCGAGGGCTTCGTCGGGGACGTGGACAGGTACGTAGAGGCCATGGACCGGATTTCCGGCGGTGGGTTCCTCCGCGGGGAGGAGGCCGAGCTCGGCGAGGACTGGGTGGAGTTGCATTGGCTGAAATCGAAGGGATACTATGGAATTGAGGCGTTTATTGCGAATAGGATCGAGGTTTCAATGAGGTTGGCGTGGTTGAATTGCTGTGGAGGGAGGAAAAGGGGTGTGAAATTGAAGGAGAAGATGGGTGCTGCGGGTGTTGGGGTGAATGTGTTTTGGAGGAAGAAGGGGTGTGTGGATTGGTGGGGGAATTTGGATGCTGGGACCAGGAGGAAGGTCATTTCCACCTTCCTCATGAAAGCTGCAAAACCCTTGACTCATGATGTTTTGGAAGTGGCAAGTAGTTCCTCTGAAGATGAGATTTGGCTATACAGTATGGGAGTGGATAAATTACTGCAAAGCAATCATCCTGTGCCATCTAAACGTAGCATTTCCGCTCTTCCTGCCGATATGGAATTTGGAACAGTTATTTCGTCAGTCACTTTTTGTAAAAAACCTGCTGCTTTAGCCAGAGCCTTTAATTCTTTATTAGTACTTCATGATGTTAATATGATGGTTACATCAAGTCTTAATAGTGAATATGACATAGAAAACCTTTTCTTTAGTTCGTTGGGTTCTGTCTGTACGATATCTGATTGTATATTAAGAAAAATGCGGGGATTTCTGATGGTTATTTCACTTGACTGCACAAAACTTGAACTATTAGGAGAGGAACATGACAAGTCTTCATCAGGTAAACCTAAAGAAAAGCCTAGTGTTTCTAACCGTAAAAAGAAGGGACGAAATCGCAATAATAAAAGGCAAAATCCTGTCTCTAAGACTTGTGTGGATGATATTTCACATGAAAATCCACTGAAGGACATTGATTGTAAAGTGGATAATAAAAAGAAGACTGATTTAGTGGCATCCAGTGAACTTCCTGCTGTTCATATGGGGAAGGAGATTTCTATGGAGTTCCCATCATCAACTGTAAAAATGGATCATACTCAAGGATTGGATATTGGCAAAATAAAAGTACGGACCACTTCAAGAAGTAGAAAAGAGAAAAATAAAAGTAAAAATATTCTCATCAGTGCAGGTGGAGATTCTCAAAAGTCAAGTATCCATGCTGCCTCTACCACAGTTATTTCTGAAGGTGAGGTGGCAATATGTGATAGGTTTTTGAATAGTTCTACCATTCAGAATGTCAAAAATGACAATGCAATTGGTAATGACATCCTTGCTTCAAATTCAAGCCTTTGTAGTTCTCTTAGTGGGCTTAGTAGGGAGAACAGTTCTACCAGGAAAGTTGAAGGAAAGACTGAAGATCTTGCTGAAAGTGGCAATAGTTTAGGTCCTCAGTGTTGTTTATTGTCAGATGAAAGGAAAACTTTATGTTCTGGATTAGATACTTTAACTTGTGACATAGATTGTACTGCTGCTACAACTCCTCCTGTACCTGCGGTGAAACAAGGTAGTTTCTTCAGCAAGGAAGATACCTGTCCTTTGAACTCATCATGTGCTGCCAAAGCTGATTTAAAGACCACTGTTCCTGACAAACCAATTAGAGAGGTTAATGCAAAAGAATTTGGGTTGTTGAAGGAGCGTGATAGATGTCTATTTGAAAGTAGAAATTCAGCTTTCTCAAAGTGCAGTCCATATGAGTGGCCTGGCTTACCTTCTATCTATTTTCCATCTTTTAACTCACATCTCCCTCCTGCCACAGATAGATTACATCTGGATGTTGGGCACAATTGGCATAATCACTTCTGCCACCCATTTGTTCCCACATTACAGCAGGCAAGAAATCCTCCTATTGAAGGTGGGTGCAACCCAATCCTGTCTCGTCCTATTCCTATGAGTTTTGACTGGCCCCCAGTTTTTCGTGGTGGCATGACCCCATCACCAAACTATAACTATGACTCTGGTTTTATATCTAGGAAGCAATGTACCTTTTCAAAAGGATTGGCTGTTCACAACATGCAGGTTGATGCAACTGCTCCTGATGATGAAAGAAAATATTCCGGGGATGTATGGGATTTACCTGATCTGACAAATACATTGGAGCTAGCTGATGAATTTGACAATCACTGTGTATCTGAGGAAGAGTATGAGGTTCATACTGTTTCTGGTATAGATTATAATCAATATTTTGGTGGCGGTGTAATGTACTGGAACCCTTCTGACTATCCAGGGAAAGGTTTCTCCCGGCCTCCCTCGCTTAGCTCTGATGACAGTCTATGGGCTTTGCGTGATGCTGACATGAATAGGACGGTGGATGATATGGTTGCTTTCTCTTCTTCGTATAGTACGAATGGTTTAACATCACCCACTGCTGCTACATTTTGTTCTCCTTTCGATCCTGTAGGAACTGCTACCCAGACTATTGGTTATGTGATGTCAGGTAATGAAGTACCTGGAAAGATGCTGCATTCTTCTTCAGTTACAGATGCAGCAGTGGATGAAGATACTTCTGGTTCTTTGGGTAATAATTTGCCTGGAGAAGTTGAAGGAAAGGCAGGTGATTCACATCCATATCCTATTCTACGGCCAATAATTATTCCTAACTTGTCAAGGGAAAGGTTTGATCATAAAAGTCCCTGTGTTCCTCCCTCCAGGCGGGAGCAGCCTCGTATAAAGCGGCCACCATCGCCTGTAGTGCTTTGTGTTCCACGTGCACCTCGTCCACCCCCACCATCCCCTGTGAGTGACTCCAGGAAACACAGGGGTTTTCCCACTGTTAGATCTGGTAGTTCCAGCCCTAGGCACTGGGGAATGCGAGGCTGGTATCATGATGGGAGTAATTTTGAGGAAGCATGTTTAAGAATGGATGGTGCTGAAGTTGTGTGGCCTTGGAGAAGTAATAATCTTGCGGTGCGACCTTTGATTCAGCCTTTACCTGCTGCCTTGCTGCAGGACCGCCTGATTGCATTGTCACAGATAGCACGTGACCAGGAACACCCAGATGTCACCTTCCCCTTGCAACCTCCAGACTTACAAAGCTGTTCTGCACAGAGTGCATCTTTAACTTTGATGCATGGCATTCTACATGATGAGATTGACTCTTTCTGTAAACAGGTTGCTGCAGAAAATATGGCCAGGAGGCCTTACATTAATTGGGCTGTCAAGAGAGTTACACGATTTCTGCAGGTTCTGTGGCCCAGATCCCGTACAAACATATTTGGTTCCAATGCAACTGGTATGTCCCTTCCAACAAGTGATGTTGACCTTGTGGTTGGTCTCCCTCCAGTGAGAAACCTGGAACCTATTAAAGAAGCTGGAATACTGGAAGGTCGTAATGGAATTAAAGAAACGTGTCTTCAGCATGCAGCTAGGTATCTTGCCAATCAGGATTGGGTGAAAAATGATTCTCTGAAGACAGTGGAAAATACAGCTATTCCTATTATTATGCTTGTGGTGGAAGTACCTCAGGATGTTATTACCTCTTTAGCTCCTATGATACAGTCGTTAAATGAAGAGCCACATTGTACTCCTGGAGAACATGGTAATGACAATCAATCTGATAGCATTCGGTTAGAAGATTCGGCTTTGCCCAAAGGCTCCCAAATGAAATTTGATGCCTTGAAATCGAAATCAGTTAGACTGGACATCAGCTTCAAGTCCCCATCACATACTGGACTCCAGACTACAGAAATGGTTAAGGAGTTGACAGCGCAATTTCCTGCTGCTACACCTCTTGCTTTGGTACTAAAACAGTTTTTGGCTGATCGGAGCCTTGATCAGTCCTACTCTGGTGGCTTAAGTTCCTACTGTTTGGTCTTACTAATTATACGATTTCTTCAGCATGAGCACCATCTTGGCCGGCCAATCAACCAAAATTATGGAAGCCTTCTGATGGATTTTCTTTACTTTTTTGGGAATGTGTTTGATCCTCGCCAAATGAGAATATCAGTTCAGGGAACTGGACTTTATATAAAAAGAGAAAGAGGTTGTAGCATTGATCCAATTCACATAGATGATCCTCTTTTTCCAACAAATAATGTGGGAAGGAATTGCTTCCGAATACATCAATGTATTAAGGCATTTTCAGAAGCTTACTCTGTTCTTGAAAATGAACTCAAATTCCTAAATAGTGATGGTGAGTCATGTTCAAGGCCACCTGACAGACTGCTTCCAAAAATCATTCCAAGTCTTGATATATCATAA 4644 0.444 MAHHQLIDTLTSHISLYHSQSPNPNPNPNPNPRSSILKWFSSLSIHHRQAHLTIVDANFVQILLQMLAKLRSHGHGSFILLPDLPSRDNLPTLCFKKSRGLLARVADSDAAGRAVFESSRLFDSREGEEAAIATLPSARRLDALALAEGFVGDVDRYVEAMDRISGGGFLRGEEAELGEDWVELHWLKSKGYYGIEAFIANRIEVSMRLAWLNCCGGRKRGVKLKEKMGAAGVGVNVFWRKKGCVDWWGNLDAGTRRKVISTFLMKAAKPLTHDVLEVASSSSEDEIWLYSMGVDKLLQSNHPVPSKRSISALPADMEFGTVISSVTFCKKPAALARAFNSLLVLHDVNMMVTSSLNSEYDIENLFFSSLGSVCTISDCILRKMRGFLMVISLDCTKLELLGEEHDKSSSGKPKEKPSVSNRKKKGRNRNNKRQNPVSKTCVDDISHENPLKDIDCKVDNKKKTDLVASSELPAVHMGKEISMEFPSSTVKMDHTQGLDIGKIKVRTTSRSRKEKNKSKNILISAGGDSQKSSIHAASTTVISEGEVAICDRFLNSSTIQNVKNDNAIGNDILASNSSLCSSLSGLSRENSSTRKVEGKTEDLAESGNSLGPQCCLLSDERKTLCSGLDTLTCDIDCTAATTPPVPAVKQGSFFSKEDTCPLNSSCAAKADLKTTVPDKPIREVNAKEFGLLKERDRCLFESRNSAFSKCSPYEWPGLPSIYFPSFNSHLPPATDRLHLDVGHNWHNHFCHPFVPTLQQARNPPIEGGCNPILSRPIPMSFDWPPVFRGGMTPSPNYNYDSGFISRKQCTFSKGLAVHNMQVDATAPDDERKYSGDVWDLPDLTNTLELADEFDNHCVSEEEYEVHTVSGIDYNQYFGGGVMYWNPSDYPGKGFSRPPSLSSDDSLWALRDADMNRTVDDMVAFSSSYSTNGLTSPTAATFCSPFDPVGTATQTIGYVMSGNEVPGKMLHSSSVTDAAVDEDTSGSLGNNLPGEVEGKAGDSHPYPILRPIIIPNLSRERFDHKSPCVPPSRREQPRIKRPPSPVVLCVPRAPRPPPPSPVSDSRKHRGFPTVRSGSSSPRHWGMRGWYHDGSNFEEACLRMDGAEVVWPWRSNNLAVRPLIQPLPAALLQDRLIALSQIARDQEHPDVTFPLQPPDLQSCSAQSASLTLMHGILHDEIDSFCKQVAAENMARRPYINWAVKRVTRFLQVLWPRSRTNIFGSNATGMSLPTSDVDLVVGLPPVRNLEPIKEAGILEGRNGIKETCLQHAARYLANQDWVKNDSLKTVENTAIPIIMLVVEVPQDVITSLAPMIQSLNEEPHCTPGEHGNDNQSDSIRLEDSALPKGSQMKFDALKSKSVRLDISFKSPSHTGLQTTEMVKELTAQFPAATPLALVLKQFLADRSLDQSYSGGLSSYCLVLLIIRFLQHEHHLGRPINQNYGSLLMDFLYFFGNVFDPRQMRISVQGTGLYIKRERGCSIDPIHIDDPLFPTNNVGRNCFRIHQCIKAFSEAYSVLENELKFLNSDGESCSRPPDRLLPKIIPSLDIS* 1548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0268 1547 Gene3D - 1347 1541 - -
Gso3g0268 1547 Pfam Nucleotidyltransferase domain 1202 1244 IPR002934 GO:0016779
Gso3g0268 1547 Coils Coil 1505 1525 - -
Gso3g0268 1547 MobiDBLite consensus disorder prediction 583 604 - -
Gso3g0268 1547 MobiDBLite consensus disorder prediction 1022 1078 - -
Gso3g0268 1547 MobiDBLite consensus disorder prediction 979 1003 - -
Gso3g0268 1547 MobiDBLite consensus disorder prediction 404 444 - -
Gso3g0268 1547 MobiDBLite consensus disorder prediction 1046 1062 - -
Gso3g0268 1547 MobiDBLite consensus disorder prediction 418 432 - -
Gso3g0268 1547 PANTHER POLY(A) RNA POLYMERASE 663 1543 IPR045862 GO:0004652|GO:0031499|GO:0043631
Gso3g0268 1547 PANTHER NUCLEOTIDYLTRANSFERASE FAMILY PROTEIN 663 1543 - -
Gso3g0268 1547 SUPERFAMILY Nucleotidyltransferase 1177 1382 IPR043519 -
Gso3g0268 1547 MobiDBLite consensus disorder prediction 1022 1039 - -
Gso3g0268 1547 SUPERFAMILY PAP/OAS1 substrate-binding domain 1387 1519 - -
Gso3g0268 1547 Gene3D Beta Polymerase, domain 2 1189 1306 IPR043519 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0268 - - mtr:MTR_4g027425 2285.38