Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0260 ATGAAGTTTGGGAAGAGACTCAAGCAACAAATTCAGGAGTCGTTGCCGGAGTGGAGGGACAAGTATTTGTCGTACAAGGAATTGAAGAAGCTCGTACGGCTCATATCGGCGGCGCCGCCAACGTTGTTGAATGGATCGTTGGAATATGGCAAGACGGAGACTGAGTTTGTGTATTTGTTGAATAATGAAATAGACAAGTTCAATGGGTTCTTCATGGAGAAAGAGGAGGACTTCATTATTCGACATATGGAAGTACAACAGAGAATCAAGAGAGTAGTTGACGTGTGGGGACCAAGTGGAAGTCAACCTTCAGAAGAAGATTATAGAGAGGAGATGGCTAAAATCAGAAAAGCTATTGTTGATTTCCACGGTGAAATGGTTCTCTTAGTCAACTACAGCAACATCAATTACACAGGGTTGGCAAAAATTCTGAAGAAATACGACAAGAGGACAGGGGGGCTTCTGCGTTTGCCATTCATCCAGAAAGTGTTGGAGCAGCCATTTTTCACAACAGATTTGATCTCAAAGCTGGTGAAGGAGTGTGAGAGCATAATCGATGCAGTGTTCCCGGCAGAGGAAGAAGCTGAGAGAGCAAAGGAAGCAAAAGATGCAATAACTGTGGCAGGAGAAGGGATTTTCAGAAACACAGTTGCGGCTTTGCTTACAATGCAAGAAATCAGAAAAGGTAGTTCCACAGAGAGCCCTTTCTCTTTGCCACCACTCAACTTGCTAGACTCTGATCTCATCCAATCAATACAACTCAATGCTGCTGTTCCCATTGTCAAGTGA 789 0.4385 MKFGKRLKQQIQESLPEWRDKYLSYKELKKLVRLISAAPPTLLNGSLEYGKTETEFVYLLNNEIDKFNGFFMEKEEDFIIRHMEVQQRIKRVVDVWGPSGSQPSEEDYREEMAKIRKAIVDFHGEMVLLVNYSNINYTGLAKILKKYDKRTGGLLRLPFIQKVLEQPFFTTDLISKLVKECESIIDAVFPAEEEAERAKEAKDAITVAGEGIFRNTVAALLTMQEIRKGSSTESPFSLPPLNLLDSDLIQSIQLNAAVPIVK* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0260 262 PANTHER SPX DOMAIN-CONTAINING PROTEIN 3 1 259 - -
Gso3g0260 262 CDD SPX_AtSPX1_like 2 150 - -
Gso3g0260 262 Pfam SPX domain 88 162 IPR004331 -
Gso3g0260 262 Pfam SPX domain 1 37 IPR004331 -
Gso3g0260 262 ProSiteProfiles SPX domain profile. 1 161 IPR004331 -
Gso3g0260 262 PANTHER SPX DOMAIN-CONTAINING PROTEIN 3 1 259 IPR031142 GO:0016036
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0260 Gso-Chr3 3685453 3689685 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0260 - - gmx:100806277 496.508