Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0256 ATGGCGGAACGCGAAACCTCCGAATCCGAGGACCCCTCGAGTTCAGGGTCGGAGTACGAGGATGCACAAACGGTAGAGGGCAATGGTGTGAAGAAGAAGAAGGGTTTGTCGGAGTACGAGAAACAGAGGATGTCGAGAATTGCCGAGAACAGAGCCAGGTTGGAGGCTCTGGGTTTGCCCCAAATCGCTTCCTCGTTAAAGGGTTCTTCGCAGCCTCACAAAGCCACGAAGGGCAAAGAGAAGAAGAAGAAGGTTAAAGATGACGATGATGAAGAGTATGAACCCGAAGAAGACGAGGGAGAACAAGTATCGGGTTCTTCAAGTGAAGAAAATGAGGACCGTAAAGACGAGGACTTTGCAATTGAAAACGCTTCAGGGTCACGGAAAAGAAAGGTGAAGAACAAAAGTTTGAAAAAGAAAGCCAGAGTTTCTGGGAAGAAGCATGTTAGTAATTCAGAGTACATTGATTACGATGATGATGAAGCTCTTAGGCAGGCAATTGCTCTTTCCTTGCAAGACTCTGCAGAAGGTTCTTATTTGCCTGACAAGAATGTAGTGAACACCAGCAAGACCGAGAAAAAGGGAAGCGGTCATGTTCAAGAAGATAAGGGAAGAAAGAACAAAAAATCGTTTGCTAGTCGGCTGCAACTGACTGAGGATGAGCTCATTGTACACTTCTTCCAGCTAGATGAAGCAGGAAAAGGAACTATAAGTGTAAGGGATATACAAAGGGCAGCTACAGCTCATGATTTTTTATGGACAGACAAAGAGTTAGTTGATATGATTCGCTACTTCGATAGTGATGGAGATGGAAAGCTAAGCCTTGATGATTTCCGGAAGATTGTTGTTCGTTGCAACTTGATTAAAGGGTCTTGA 876 0.4475 MAERETSESEDPSSSGSEYEDAQTVEGNGVKKKKGLSEYEKQRMSRIAENRARLEALGLPQIASSLKGSSQPHKATKGKEKKKKVKDDDDEEYEPEEDEGEQVSGSSSEENEDRKDEDFAIENASGSRKRKVKNKSLKKKARVSGKKHVSNSEYIDYDDDEALRQAIALSLQDSAEGSYLPDKNVVNTSKTEKKGSGHVQEDKGRKNKKSFASRLQLTEDELIVHFFQLDEAGKGTISVRDIQRAATAHDFLWTDKELVDMIRYFDSDGDGKLSLDDFRKIVVRCNLIKGS* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0256 291 Pfam EF-hand domain pair 221 282 IPR002048 GO:0005509
Gso3g0256 291 MobiDBLite consensus disorder prediction 178 210 - -
Gso3g0256 291 MobiDBLite consensus disorder prediction 25 44 - -
Gso3g0256 291 MobiDBLite consensus disorder prediction 130 145 - -
Gso3g0256 291 SUPERFAMILY EF-hand 211 285 IPR011992 -
Gso3g0256 291 MobiDBLite consensus disorder prediction 194 210 - -
Gso3g0256 291 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 158 177 IPR003903 -
Gso3g0256 291 ProSiteProfiles EF-hand calcium-binding domain profile. 253 288 IPR002048 GO:0005509
Gso3g0256 291 Gene3D - 178 288 - -
Gso3g0256 291 SMART efh_1 257 285 IPR002048 GO:0005509
Gso3g0256 291 MobiDBLite consensus disorder prediction 90 106 - -
Gso3g0256 291 ProSitePatterns EF-hand calcium-binding domain. 266 278 IPR018247 -
Gso3g0256 291 MobiDBLite consensus disorder prediction 107 129 - -
Gso3g0256 291 CDD EFh 229 282 IPR002048 GO:0005509
Gso3g0256 291 MobiDBLite consensus disorder prediction 1 44 - -
Gso3g0256 291 MobiDBLite consensus disorder prediction 62 145 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0256 33 291 EF-hand Containing Proteins AT1G73440 41.699 3.23e-50 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0256 - - gmx:100806103 471.855