Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0218 ATGGAAGTGGGTATGCTTCCAATCTCAGCTTCAAAGAGAGGAAAACTCTTGGCTGCTGGTTACACCACTCTCGATGCCATTGCTCGTGCCTCCCCCACCCACCTTGCTCGAGATATTGATGTTTCTGAGAGTGAAGCCACGGAAATTCTGAATCTTGCAAGCAAACCTAGTGCTTTGGAGAGACCGAATGGGTCTCACACTGCTGTTGTTGGTGATCTGGATAACATCCTTGGTGGAGGAATTAAGTGCAAAGAAGTCACTGAAATAGGTGGAGTTCCAGGCATTGGTAAAACACAAATTGGGATTCAACTTGCGGTAAATGTTCAGATTCCACAAGAATATGGTGGCCTAGGTGGGAAGGCAATATACATCGACACAGAAGGAAGCTTTATGGTTGAACGTGTTCTACAAATTGCTGAAGCATGCATAGAAGATATGGCAGAATACAGCCGGCACTTTCATAAGGATTTTCAAGCTTGTGATGTTAAAATGCACCCTAATAATATCTTAGAAAATATATTCTATTTTCGTGTTTGCAGCTACACTGAGCAAATTGCTTTGATAAATTACTTGGACAAATTCATCACAGAGAATAAAGATGTAAAGATCCTCATTGTTGACAGTGTTACTTTCCACTTCCGCCAAGACTTTGATGATATGGCTCTCAGAACTCGATTACTCAGTGAAATGGCTTTGAAGTTGATGAAGCTTGCAAAAAAATTCCGTTTGGCTGTTGTTATGTTCAATCAAGTAACAACCAAGCATATTGAAGGTTCATTTCAATTGACCCTTGCACTAGGAGATAGTTGGTCGCATTCATGCACAAATAGGATAATCTTGTTTTGGAATGGCAACGAACGACACGCATTTATCGACAAGTCCCCTTCTCTGAAATCAGCATCAGCTCCATATTCTGTGACAACTAGAGGGATACGCAATTCTACTTCAAGCTGCAAACGAATCAAGATGATGTGA 975 0.4123 MEVGMLPISASKRGKLLAAGYTTLDAIARASPTHLARDIDVSESEATEILNLASKPSALERPNGSHTAVVGDLDNILGGGIKCKEVTEIGGVPGIGKTQIGIQLAVNVQIPQEYGGLGGKAIYIDTEGSFMVERVLQIAEACIEDMAEYSRHFHKDFQACDVKMHPNNILENIFYFRVCSYTEQIALINYLDKFITENKDVKILIVDSVTFHFRQDFDDMALRTRLLSEMALKLMKLAKKFRLAVVMFNQVTTKHIEGSFQLTLALGDSWSHSCTNRIILFWNGNERHAFIDKSPSLKSASAPYSVTTRGIRNSTSSCKRIKMM* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0218 324 Gene3D - 14 61 - -
Gso3g0218 324 Gene3D - 65 315 IPR027417 -
Gso3g0218 324 PIRSF Rad51 1 317 IPR016467 -
Gso3g0218 324 ProSiteProfiles RecA family profile 1. 62 251 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Gso3g0218 324 PANTHER DNA REPAIR PROTEIN RAD51 HOMOLOG 3 RAD51C 1 324 - -
Gso3g0218 324 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 71 312 IPR027417 -
Gso3g0218 324 SUPERFAMILY Rad51 N-terminal domain-like 4 56 IPR010995 GO:0000166
Gso3g0218 324 Pfam Rad51 72 313 IPR013632 -
Gso3g0218 324 CDD Rad51_DMC1_radA 72 312 IPR033925 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0218 Gso-Chr3 3027905 3031965 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0218 K10870 - gmx:100527406 627.091