Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0216 ATGGCCCAAGTGAGCAGAGTGCACAATCTTGCTCAAAGCACTCAAATTTTCGGTCATTCTTCCAATCCCAACAAACCCAAATCGGCGAATTCGGTTTCATTGAGGCCACGCCTTTGGGGTCCCTCAAAATCTCGCATCTTGGTGAACAAAACTGGAAGCTTTATGGGAAATTTTAATGGGGGGAAGGGAAATTCCGGCATGTTTAAGGTTTCTGCCTCCGTCGCCGCCGCCGCAGAGAAGCCTTCGACGGCGCCGGAGATCGTGTTGGAACCTATCAAAGACATCTCGGGTACCATCACATTGCCAGGGTCTAAGTCTCTGTCCAATCGAATTTTGCTTCTTGCTGCTCTCTCTGAGGGAACAACTGTTGTAGACAACTTGCTGTACAGCGAGGATATTCATTACATGCTTGGTGCATTAAGGACCCTTGGACTGCGTGTGGAAGACGACCAAACAACCAAACAAGCAATTGTGGAAGGCTGTGGGGGATTGTTTCCCACTATTAAAGAATCTAAAGATGAAATCAATTTATTCCTTGGAAATGCTGGTACTGCGATGCGTCCTTTGACAGCAGCTGTAGTTGCTGCAGGTGGAAATGCAAGCTACGTACTTGATGGAGTGCCCCGAATGAGAGAGAGGCCAATTGGGGATTTGGTTGCTGGTCTTAAGCAGCTCGGTGCAGATGTTGATTGCTTTCTTGGCACAAACTGTCCACCTGTTCGTGTAAATGGGAAGGGAGGACTTCCTGGCGGAAAGGTGAAACTGTCTGGATCAGTTAGCAGTCAATACCTAACTGCTTTGCTTATGGCAGCTCCTTTAGCTCTTGGCGATGTGGAAATTGAGATTGTTGATAAACTGATTTCTGTTCCATATGTTGAAATGACTCTGAAGTTGATGGAGCGTTTTGGAGTTTCTGTGGAACACAGTGGTAATTGGGATAAGTTCTTGGTCCATGGAGGTCAAAAGTACAAGTCTCCTGGCAATGCTTTTGTTGAAGGTGATGCTTCAAGTGCCAGTTACTTCCTAGCTGGTGCAGCAGTTACTGGTGGGACTATCACTGTTAATGGCTGTGGCACAAGCAGTTTACAGGGAGATGTAAAATTTGCTGAAGTTCTTGAAAAGATGGGAGCTAAGGTTACATGGTCAGAGAACAGTGTCACCGTTACTGGACCGCCACAAGATTCTTCTGGTCAAAAAGTCTTGCAAGGCATTGATGTCAATATGAACAAGATGCCAGATGTTGCCATGACTCTTGCCGTTGTCGCACTATTTGCTAATGGTCAAACTACCATCAGAGATGTGGCAAGTTGGAGAGTTAAAGAGACTGAGAGGATGATAGCAATCTGCACAGAACTCAGAAAGCTAGGAGCAACAGTTGAAGAAGGTCCTGATTACTGTGTGATTACTCCACCTGAGAAATTGAATGTCACAGCTATAGACACATATGATGACCACAGAATGGCCATGGCATTCTCTCTTGCTGCTTGTGGGGATGTTCCAGTAACCATCAAGGATCCTGGTTGCACCAGGAAGACATTTCCCGACTACTTTGAAGTCCTTGAGAGGTTCACAAAGCACTAA 1581 0.4605 MAQVSRVHNLAQSTQIFGHSSNPNKPKSANSVSLRPRLWGPSKSRILVNKTGSFMGNFNGGKGNSGMFKVSASVAAAAEKPSTAPEIVLEPIKDISGTITLPGSKSLSNRILLLAALSEGTTVVDNLLYSEDIHYMLGALRTLGLRVEDDQTTKQAIVEGCGGLFPTIKESKDEINLFLGNAGTAMRPLTAAVVAAGGNASYVLDGVPRMRERPIGDLVAGLKQLGADVDCFLGTNCPPVRVNGKGGLPGGKVKLSGSVSSQYLTALLMAAPLALGDVEIEIVDKLISVPYVEMTLKLMERFGVSVEHSGNWDKFLVHGGQKYKSPGNAFVEGDASSASYFLAGAAVTGGTITVNGCGTSSLQGDVKFAEVLEKMGAKVTWSENSVTVTGPPQDSSGQKVLQGIDVNMNKMPDVAMTLAVVALFANGQTTIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLNVTAIDTYDDHRMAMAFSLAACGDVPVTIKDPGCTRKTFPDYFEVLERFTKH* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0216 526 SUPERFAMILY EPT/RTPC-like 87 522 IPR013792 GO:0003824
Gso3g0216 526 PANTHER AROM/DEHYDROQUINATE SYNTHASE 65 526 - -
Gso3g0216 526 Gene3D Enolpyruvate transferase domain 320 525 IPR036968 GO:0016765
Gso3g0216 526 CDD EPSP_synthase 95 523 IPR006264 GO:0003866|GO:0009073
Gso3g0216 526 ProSitePatterns EPSP synthase signature 2. 438 456 IPR023193 -
Gso3g0216 526 Gene3D Enolpyruvate transferase domain 103 315 IPR036968 GO:0016765
Gso3g0216 526 PANTHER 3-PHOSPHOSHIKIMATE 1-CARBOXYVINYLTRANSFERASE, CHLOROPLASTIC 65 526 - -
Gso3g0216 526 TIGRFAM aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 97 525 IPR006264 GO:0003866|GO:0009073
Gso3g0216 526 Pfam EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 90 520 IPR001986 GO:0016765
Gso3g0216 526 ProSitePatterns EPSP synthase signature 1. 177 191 IPR023193 -
Gso3g0216 526 Hamap 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 93 526 IPR006264 GO:0003866|GO:0009073
Gso3g0216 526 MobiDBLite consensus disorder prediction 13 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0216 Gso-Chr3 3008907 3017132 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0216 K00800 - gmx:100811089 991.875