Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0191 ATGTCGTTATCCGATTCTGAAACGCCGTACGGCGGTGGAACGGAGTACAAGCCTTTCCGCCATATCAGCCGCGATCGGTTATTAATTGAAATGCTTAGATCGGCAAAGTCACCTGATTCGAAAGCTTGGAAGGTGCTAATAATGGATAAAGTCACGGTGAAAGTTATGTCACATTCATGTAAAATGGCAGATATTACAGACCAAGAAATTTCCTTGGTGGAAGACCTTTTCCGGAGAAGGCAACCATTACCATCTTTGGATGCTGTTTATTTCATGCAGCCTTCTAAAGAGAATGTGGTCATGTTCCTGTCTGATATGTCTGGAAGGGAGCCCCTGTATAAGAAAGCCTATGTATTTTTCAGTTCACCAATCCCAAAGGAACTTGTAAACCACATCAAGTGTGATACAAGTGTCTTACCCCGCATAGGTGCACTGAGAGAGATGAATTTGGAATATTTTCCAATAGATAGCCAGGGTTTTATCACTGATCAAGAAACAGCAATGGAAGAACTTTACGGCAATATTGAGAATACTCGCAGATTTAACACCTGCTTGAATAATATGGCTATTCGAATAGCTACAGTTTTTGCTTCATTGAAGGAGTTACCATGTGTGTGGTATCGTGCTGCAAAGGATAGCGACGAGTCTACAGCAACAGCAGTTCGTGAATTAGTTCCTACCAAGCTTGCTAATGCTGTTTGGGACATGGTTTCTAAATATAAATCTACCATTCCCGGTTTTCCACAAAATGAAACTTGTGATATGCTCATTGTTGACAGATCCGTAGACCAGATTGCACCTGTCATTCATGAATGGACCTATGATGCTATGTGCCATGATTTGTTGACTATGGATGGAGATAAATATATGCATGAGGTTCCCAGCAAAGTCGGGGGTCAACCTGAGATAAAGGAGGTTATTCTACAAGACCATGATTCTGTCTGGCTTGAACTACGCCACACTCATATAGCAGATGCTAGTGAAAGACTGCATGAAAAGTTTACCAATTTCGTATCAAAGAACAAAGCAGCACAAATTCAACAAAGCGGAAGAGATGGTAGTGAACTATCTACACGAGATTTGCAAAAAATGGTTCAAGCTTTGCCCCAATACACTGAACAAGTGGAAAAGATCTCACTCCATGTAGAGATAGCTGGAAAGATCAACAAAATTATCAGAGAAACAGACCTTCGAGAGCTTGGACAGTTGGAACAAGATCTTGTTTTTGGGGATGCTGGAGCCAAGGAAGTTATTAATTTTTTAAGAACAAAGCAGAATACAACTCCTGAATATAAGTTGCGTTTGTTGATGATTTATGCATCTGTCTATCCTGAAAAGTTTGAGGGTGATAAAGCTTCAAAACTAATGCAGTTGGCAAAACTATCACCTGATGACATGAAAGTTATCAGTAATATGCAACAGCTGGCGGGATCATCAAACAAGAAATCATCTGCTGCTGGTGGTTTCTCACTCAAGTTCAGTAACCAGAAGACAAAGCAAGCAGCGCGCAAAGATCGTACTGAAGAGGAAGAAACATGGCAATTATTTCGATTTTATCCCATGTTAGAGGAGCTCATTGAAAATCTAAGTAAGGGAGAATTGGCAAAGAATGAATATTCCTGTATAAATGAGCCAAATCCTAGTAATGCACGAGGTTCAGTTAGAATCAGCAAACAGACCCAGACACCTCCAACTACTGCTCCTCATTCAATGAGATCTAGGAGGACTGCAAACTGGGGACGAGCTCGTACTTCGGATGATGGATATTCAAGTGACTCCACATTGAAGAATGTGACTACTGATTTCAAAAGGATGGGAAAGCGAATCTTTGTGTTTATCATTGGTGGGGCTACTCGATCAGAGCTGCGAGTTTGTCACAAGTTGACACCAAAATTAAAAAGGGAAGTAATCCTAGGTACTACTTCCATGGACGATCCTCCACAATATCTTACGAAATTAAAGTTATTGTTCGACAACAATGTTTCACAGCTGAATGGCCTCGGGATATAA 2010 0.408 MSLSDSETPYGGGTEYKPFRHISRDRLLIEMLRSAKSPDSKAWKVLIMDKVTVKVMSHSCKMADITDQEISLVEDLFRRRQPLPSLDAVYFMQPSKENVVMFLSDMSGREPLYKKAYVFFSSPIPKELVNHIKCDTSVLPRIGALREMNLEYFPIDSQGFITDQETAMEELYGNIENTRRFNTCLNNMAIRIATVFASLKELPCVWYRAAKDSDESTATAVRELVPTKLANAVWDMVSKYKSTIPGFPQNETCDMLIVDRSVDQIAPVIHEWTYDAMCHDLLTMDGDKYMHEVPSKVGGQPEIKEVILQDHDSVWLELRHTHIADASERLHEKFTNFVSKNKAAQIQQSGRDGSELSTRDLQKMVQALPQYTEQVEKISLHVEIAGKINKIIRETDLRELGQLEQDLVFGDAGAKEVINFLRTKQNTTPEYKLRLLMIYASVYPEKFEGDKASKLMQLAKLSPDDMKVISNMQQLAGSSNKKSSAAGGFSLKFSNQKTKQAARKDRTEEEETWQLFRFYPMLEELIENLSKGELAKNEYSCINEPNPSNARGSVRISKQTQTPPTTAPHSMRSRRTANWGRARTSDDGYSSDSTLKNVTTDFKRMGKRIFVFIIGGATRSELRVCHKLTPKLKREVILGTTSMDDPPQYLTKLKLLFDNNVSQLNGLGI* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0191 669 Gene3D - 152 275 IPR027482 -
Gso3g0191 669 PANTHER VESICLE PROTEIN SORTING-ASSOCIATED 20 656 IPR001619 GO:0016192
Gso3g0191 669 SUPERFAMILY Sec1/munc18-like (SM) proteins 30 656 IPR036045 -
Gso3g0191 669 Gene3D Syntaxin Binding Protein 1; Chain A, domain 2 276 392 IPR043127 -
Gso3g0191 669 PIRSF VPS45_Sec1 14 663 IPR001619 GO:0016192
Gso3g0191 669 MobiDBLite consensus disorder prediction 545 573 - -
Gso3g0191 669 Gene3D - 396 518 - -
Gso3g0191 669 Pfam Sec1 family 44 650 IPR001619 GO:0016192
Gso3g0191 669 MobiDBLite consensus disorder prediction 545 592 - -
Gso3g0191 669 Gene3D - 520 659 IPR027482 -
Gso3g0191 669 Gene3D - 14 147 IPR043154 -
Gso3g0191 669 PANTHER PROTEIN TRANSPORT SEC1A 20 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0191 Gso-Chr3 2556161 2572133 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0191 K15292 - gmx:100783301 1330.47