Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0178 ATGTGCTCTTTCTCTTCAGAACAGTCCTCACCATATGATGATCTTCCTCTTGTTCACCCTCCATGGCCATCCAAGAGACAGCCCCAGCACCTTCGGTTCAGCCTCCATAAAAGAAGGAGAGCACAATTGCAAGAAGCAAGACGGAGGAAAAGGATGATCATATTGAAGACTGAAATAAAGATGAGAAACTTGAAGTTGTACATGGAGAACCAAAGCATCATAGAGGAGAATGAGAAGTTAAGGAAGCAAGCAGTGCTTCTTCACAAAGAGAATGAGGCCCTCTTATTTCAACTTCAAAAGAAGCTTTCCGAACAAAATAACAGCAAAACCAATCAAATAGCTGTTAGCTAG 351 0.4188 MCSFSSEQSSPYDDLPLVHPPWPSKRQPQHLRFSLHKRRRAQLQEARRRKRMIILKTEIKMRNLKLYMENQSIIEENEKLRKQAVLLHKENEALLFQLQKKLSEQNNSKTNQIAVS* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0178 116 Coils Coil 70 90 - -
Gso3g0178 116 PANTHER PROTEIN LITTLE ZIPPER 1 1 111 - -
Gso3g0178 116 MobiDBLite consensus disorder prediction 1 30 - -
Gso3g0178 116 PANTHER PROTEIN LITTLE ZIPPER 4 1 111 IPR039312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0178 Gso-Chr3 2314065 2315555 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0178 - - gmx:100305804 224.942
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1231 1 48426091 48427454 Gso3g0178 3 2314065 2315555 GST
Gso18g2059 18 53536074 53537358 Gso3g0178 3 2314065 2315555 PCT
Gso9g2209 9 46445706 46447008 Gso3g0178 3 2314065 2315555 PCT
Gso3g0178 3 2314065 2315555 Gso18g2059 18 53536074 53537358 PCT
Gso3g0178 3 2314065 2315555 Gso9g2209 9 46445706 46447008 PCT