Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0160 ATGAACGGTGGTGGAGGTGACTTGCCGCCGTCCAACGGCGGCGAGTTCCTCCTCTCTCTCATCCAACAGCGCCCCCACCACCCCCACCCGCCGCCACAGTCTCCGGCGATAGATCCCGCCGTCACCGCTATTGGCCCCATGATCCCCGTGGCGCTGCCGCCGTGGCAAATCGCCGGCGCCGATCAACCCCACCACCACCAACATACTCACCCTCACCATCTCCCACCACCACCACCCTGGTCCCACACTCTCTCTTCTTCTTCGCCGCTTTACCCTCCGAACTTCTTCGGGTTGCCCCATAACCCGTTTCCCCCTCCTCGGAACCACTTCCCCGTCACCGTCACCCCTAACTCCGTCACTAACGGCGTCAACGCTAACGTTAACCTCGCCCACGATCTTCGAAAACTAGGGTTTCCAATTGAAGAAAGCCACCACAACAATAATAACAACAACAACGTGGTCGATGGTTTCGTTCATCATCATCAGCAGCAGCAGCAGCAGCAGCAGCATGAACTGAAGCTGCAGTTCGGGTCTTTACCCACGGTTGCGTATGCCGCCGCCGAAGTTTCCTCCAATGGTGACTCCTTGCTCAATTTGAAGTTCAACAGAGGTGGGAATGTGGTTCACCCCACTTCGAATTCGAGTGGGAATGTGGTTCTTCAGGGTAACCATGATGCTGTGGAGAGAGAAAGAAGAGGACTTGGGGGTTATATGGCTGGTGGGTCGTTACCCCCCGAGACAAGTAGGGTTGCACCAGGGTTTGGGAACAGGATTAGAGGGAAGGGTTTGGAGGGTAGGAATGAGAATTTGTATGGTAGGAGGGAAGGTGGGAGAATGGTGTCTGGTGAGAGGAGCAATGTGGGACTTGTTGATCAGCTTGATCGTCCTGGGCCACCGGCCCGGAGTCACCTCCATTCGGGTTCGGGGAATGAGACCAGTGGCATTGGTGAAGTTGGTGGTAGGGATAGTAAGCACAAGGGAAGTGGGAGATTGAGGATGGAGGGTTTTCCTGAGTCTGGTGGAAGGGTTGCTGATGTTGATGTCCTTGGGGAGCAGTTAGCTGATTCCTTGTTGGTAGAGGATGAGTCTGATGACAGGACTAACTTGAGGCAACGCCGCCGAGAGAAGGATGTTAGATTTTTGGATTCAAGAGGACAGCAGATAATGAGCCAGCGGGGAAGAATGTACAGAAGGCAGATGATGTGTCGAAGGGACATTGATGATTTTAATGTTCCTTTCCTTGCAATATATGGGTCTCTAATACCTCCTGAAGAAGAAAAGCTGAAGCAAAAGCAATTAGTAGCGATATTGGAGAAATTAGTCAGCAAAGAATGGCCAGCATCTAAGCTATATCTCTATGGATCATGTGCTAATTCGTTTGGTGTTTCTAAAAGTGACATTGATGTTTGCCTTGCTATTGAGGAAGCAGACATGGAAAAATCTAAGATTATAATGAAATTGGCGGATATTTTGCAATCAGATAATCTGCAGAATGTGCAGGCCTTGACACGTGCACGGGTTCCCATAGTAAAGCTCATGGATCCAGTGACAGGAATCTCTTGCGACATATGCATTAACAATCTCCTAGCTGTTGTGAATACCAAGCTTCTTCGGGATTATGCACACATAGATCCAAGGTTGCGTCAGCTGGCTTTCATTATTAAACATTGGGCTAAGTCAAGAAGAGTCAATGAAACTTACCATGGGACCTTGTCTAGCTATGCGTATGTTTTGATGTGCATTCATTTTTTACAAATGAGAAGACCTGCTATCCTTCCATGCTTGCAGGAGATGGAGACAACGTATTCTGTAACTGTGGATGATGTTCATTGTGCTTACTTTGATCAAGTTGAAAAACTTTGTGATTTTGGTCGCCATAACAAGGAATCAATTGCTCAGCTTGTGCGGGGATTTTTCCATTATTGGGCATATTGTCATGATTATGCAAATACTGTTATATCTGTACGCACTGGAAGCATAATCAGCAAGCGAGAGAAGGACTGGACAAGAAGGATAGGTAATGATCGCCATTTGATATGTATAGAGGATCCTTTTGAAATATCTCATGATCTAGGTCGAGTGGTAGATAAACATAGCATCAAAGTTCTCAGGGAAGAGTTTGAACGTGCTGCTGAAGTTATGCAGAATGATCCAAATCCATGTATTAAACTTTTTGAGCCCTATGTTCCCAGTTAA 2196 0.4786 MNGGGGDLPPSNGGEFLLSLIQQRPHHPHPPPQSPAIDPAVTAIGPMIPVALPPWQIAGADQPHHHQHTHPHHLPPPPPWSHTLSSSSPLYPPNFFGLPHNPFPPPRNHFPVTVTPNSVTNGVNANVNLAHDLRKLGFPIEESHHNNNNNNNVVDGFVHHHQQQQQQQQHELKLQFGSLPTVAYAAAEVSSNGDSLLNLKFNRGGNVVHPTSNSSGNVVLQGNHDAVERERRGLGGYMAGGSLPPETSRVAPGFGNRIRGKGLEGRNENLYGRREGGRMVSGERSNVGLVDQLDRPGPPARSHLHSGSGNETSGIGEVGGRDSKHKGSGRLRMEGFPESGGRVADVDVLGEQLADSLLVEDESDDRTNLRQRRREKDVRFLDSRGQQIMSQRGRMYRRQMMCRRDIDDFNVPFLAIYGSLIPPEEEKLKQKQLVAILEKLVSKEWPASKLYLYGSCANSFGVSKSDIDVCLAIEEADMEKSKIIMKLADILQSDNLQNVQALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAHIDPRLRQLAFIIKHWAKSRRVNETYHGTLSSYAYVLMCIHFLQMRRPAILPCLQEMETTYSVTVDDVHCAYFDQVEKLCDFGRHNKESIAQLVRGFFHYWAYCHDYANTVISVRTGSIISKREKDWTRRIGNDRHLICIEDPFEISHDLGRVVDKHSIKVLREEFERAAEVMQNDPNPCIKLFEPYVPS* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0160 731 MobiDBLite consensus disorder prediction 318 332 - -
Gso3g0160 731 SUPERFAMILY Nucleotidyltransferase 415 542 IPR043519 -
Gso3g0160 731 MobiDBLite consensus disorder prediction 292 342 - -
Gso3g0160 731 SUPERFAMILY PAP/OAS1 substrate-binding domain 545 717 - -
Gso3g0160 731 MobiDBLite consensus disorder prediction 58 85 - -
Gso3g0160 731 PANTHER POLY A POLYMERASE CID PAP -RELATED 67 730 - -
Gso3g0160 731 Gene3D - 544 712 - -
Gso3g0160 731 CDD NT_PAP_TUTase 431 541 - -
Gso3g0160 731 PANTHER UTP:RNA URIDYLYLTRANSFERASE 1 67 730 - -
Gso3g0160 731 Pfam Cid1 family poly A polymerase 630 689 IPR002058 -
Gso3g0160 731 MobiDBLite consensus disorder prediction 235 261 - -
Gso3g0160 731 Gene3D Beta Polymerase, domain 2 430 543 IPR043519 -
Gso3g0160 731 Pfam TUTase nucleotidyltransferase domain 425 523 IPR045100 GO:0016779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0160 Gso-Chr3 2041116 2046470 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0160 - - gmx:100818029 1348.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0706 7 7662065 7667501 Gso3g0160 3 2041116 2046470 GST