Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0157 ATGAGCGACGGAGGAAAACGACAAGGTGGAAGAGCGTTGCCGCCGCCGCCAAGAGGCCCTCCGCCTCCTCCCCCCTCTCGCCCTCGCCTCGAACCCGTCGATCGCGAAAAGACATGTCCGTTACTGCTGCGAGTGTTCACTAAGATTGGGAGTCACCATTCCATGGAAGACTTTGCCGTCAGAGGCAAAGAGCCCAAAGACGAGGTTCAGATTTACACCTGGAAGGACGCTACTCTCCGAGAACTCACCGATCTTGTCAAAGAAGTTGCTCCGGCTGCAAGGAGAAGAAACGCCAAACTCTCCTTCGCCTTTGTATTCCCCGACAAAAACGGCCGTTTCAAAGTTCAAGAGGTGGGCAAGACATTATCTTATGGAAATGGAAGATTAGATGATGGCAAGGCTTTAGCCGAACTTGGTTTTGAAATCGGTGACTACTTGGATGTGGCTATTCTGTAG 456 0.5197 MSDGGKRQGGRALPPPPRGPPPPPPSRPRLEPVDREKTCPLLLRVFTKIGSHHSMEDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEVAPAARRRNAKLSFAFVFPDKNGRFKVQEVGKTLSYGNGRLDDGKALAELGFEIGDYLDVAIL* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0157 151 MobiDBLite consensus disorder prediction 13 28 - -
Gso3g0157 151 PANTHER DEACETYLASE COMPLEX SUBUNIT SAP18, PUTATIVE-RELATED 6 151 - -
Gso3g0157 151 MobiDBLite consensus disorder prediction 1 35 - -
Gso3g0157 151 PANTHER SAP18 6 151 IPR010516 -
Gso3g0157 151 Gene3D ASAP complex, SAP18 subunit 25 151 IPR042534 -
Gso3g0157 151 Pfam Sin3 associated polypeptide p18 (SAP18) 32 150 IPR010516 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0157 Gso-Chr3 1990616 1992637 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0157 K14324 - gmx:100526922 279.256