Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0134 ATGGGAATAAGCACACGTACGCTGGAGATCACAGTTATCTCCTGCGAAAACCTCCACGGCGTAAAGGACGACGCGTACGTGGTTGTTCGGGCGGAGTCCTTAAACTGCTGCACCACCAGAAGGGTCAAAGTCGACGACGGCACCAAAAAACTTCTCTCGTGGAACCAGAAGTTCTTGTTGGACATGCCCATGCATGCAAGGTCCATAACCTTCGAAGTGCAATGTAACAGGTTCAAGGGCTCCCGGCCACTCGGGGTTGCCCGAATCGCCGCCTCCGATTTCCTCGGTGGCGCAGCCCTGCCGGAGAATCGGTTGCAGGTGCTGAGTTACGGGCTGAGGGACTGGGAAGGGAAGAGGAATGGGGTCATTCATTTCTCCGTGAGGGTGGCCGCATCGTCGAAGACGACGGAGGAGGAGTGTTTGAATATGAAGCCCGCCGTGGAACTGGTGGTGGCGAGAAAGGGTTGCGGTGATCGAATCAATGTCGGTGGCAAGAGGTCCAATGAAGTTGCTGTTGGTGTTCCGTTTTGGTGGAACTACCCCAACATTATTTAG 555 0.5495 MGISTRTLEITVISCENLHGVKDDAYVVVRAESLNCCTTRRVKVDDGTKKLLSWNQKFLLDMPMHARSITFEVQCNRFKGSRPLGVARIAASDFLGGAALPENRLQVLSYGLRDWEGKRNGVIHFSVRVAASSKTTEEECLNMKPAVELVVARKGCGDRINVGGKRSNEVAVGVPFWWNYPNII* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0134 184 PANTHER INGRESSION PROTEIN FIC1 5 181 - -
Gso3g0134 184 Gene3D C2 domain 5 129 IPR035892 -
Gso3g0134 184 PANTHER BON1-ASSOCIATED-LIKE PROTEIN 5 181 - -
Gso3g0134 184 Pfam C2 domain 7 97 IPR000008 -
Gso3g0134 184 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 129 IPR035892 -
Gso3g0134 184 CDD C2_SRC2_like 7 125 IPR044750 GO:0006952
Gso3g0134 184 SMART C2_3c 7 103 IPR000008 -
Gso3g0134 184 ProSiteProfiles C2 domain profile. 1 116 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0134 Gso-Chr3 1559305 1560193 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0134 - - gmx:100807334 373.244