Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0133 ATGGGGGCAAGCTCGGGTATAGTACTAGAAATCACAGTTATATCATGCGAAAACCTTCGTGTCACGGAGGATCCATACGTTGTCGTTAGGGCTGAGTCGTTAAATTGTTGCACCTCGAATATAGCGAAGGATTGTGGGAGCAACAAAACGAGTTTGTTTTCGTGGAACGAGAAGTTGATGCTGAACATGCCCATGCATGCAAGGTCCATCACGTTCGAGGTGCAATGCAACAGGTTCAAGGGCTTTCGACCTGCTGGGGTGGCCAGAATCGCCGTGTCGGATTTTCTCGGCGGCGCTGTGTCGGAAAACTGCATGCACGTGTTGAGTTACCGGCTGAGGGACTGGGAAGGGAAAGAAAACGGGGTGATTCATTTCACGATGAGGGTGGCGGCAGCGCCGGTGAAGGGGACGGTGGTGAGTAAGGGTTCCGGTGATGGGTTCGTGGGAATCAACGTTGGTGGCAACAAGTGCAACGAAGTTGTTGTTGGTGTACCGTTTTGA 501 0.519 MGASSGIVLEITVISCENLRVTEDPYVVVRAESLNCCTSNIAKDCGSNKTSLFSWNEKLMLNMPMHARSITFEVQCNRFKGFRPAGVARIAVSDFLGGAVSENCMHVLSYRLRDWEGKENGVIHFTMRVAAAPVKGTVVSKGSGDGFVGINVGGNKCNEVVVGVPF* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0133 166 Pfam C2 domain 9 103 IPR000008 -
Gso3g0133 166 CDD C2_SRC2_like 9 125 IPR044750 GO:0006952
Gso3g0133 166 Gene3D C2 domain 7 129 IPR035892 -
Gso3g0133 166 SMART C2_3c 8 104 IPR000008 -
Gso3g0133 166 PANTHER BON1-ASSOCIATED-LIKE PROTEIN 6 166 - -
Gso3g0133 166 PANTHER INGRESSION PROTEIN FIC1 6 166 - -
Gso3g0133 166 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 7 129 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0133 Gso-Chr3 1555021 1556007 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0133 - - gmx:100806805 340.117