Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0132 ATGGAGGTAAAACCACAAGCACGCACCTTAGAGATAACGGTTATGTCGGGAGAAAACATAAGCATGGATCGAAGTTCGGTGGCGGAGAACGTGTATGTTGTTGTTCGTGCCGAATCTCTTAACTCTTGCAGAACCAAAATGGTGAATGAAGAAGGTGGAGTGCATGCATGGAATGAGAAGTTTTTATTAGACATTCCTTTGTATGCAAAATCAGTTACGTTTGAGGTGCAATGCAAGAAATATAAAGGAGTTCGCCCTATTGGGGTAGCAAGGATAGCACTTTCGGATCTTCTTAGTAACAATACTAAGGTTGTTTCCGAAGGTAGTGTGCCTCAAATGTTGTGTTACGGGTTGAGGAATTCGGAAGGTCGACCAAACGGGGTTATTCATTTCTCCGTGAGAATGGTGGCACCAAGGGATAATTTGTACTCACTAACAAAACAAGAAAAAGACATCACAACGATGAGTTCTAAAGGAATTGAACATGAGGTTATGGGGATTCAGGTGGACCCAAAAATTTCACCTCATGTTGCCATTGGCATTCCAGTTTGGTGGAGTTACCAAAGCGTTATTTGA 576 0.4219 MEVKPQARTLEITVMSGENISMDRSSVAENVYVVVRAESLNSCRTKMVNEEGGVHAWNEKFLLDIPLYAKSVTFEVQCKKYKGVRPIGVARIALSDLLSNNTKVVSEGSVPQMLCYGLRNSEGRPNGVIHFSVRMVAPRDNLYSLTKQEKDITTMSSKGIEHEVMGIQVDPKISPHVAIGIPVWWSYQSVI* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0132 191 CDD C2_SRC2_like 9 131 IPR044750 GO:0006952
Gso3g0132 191 Pfam C2 domain 9 101 IPR000008 -
Gso3g0132 191 PANTHER C2 DOMAIN PROTEIN 6 190 - -
Gso3g0132 191 PANTHER INGRESSION PROTEIN FIC1 6 190 - -
Gso3g0132 191 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 136 IPR035892 -
Gso3g0132 191 SMART C2_3c 9 106 IPR000008 -
Gso3g0132 191 Gene3D C2 domain 7 136 IPR035892 -
Gso3g0132 191 ProSiteProfiles C2 domain profile. 1 109 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0132 Gso-Chr3 1549335 1550198 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0132 - - gmx:100806275 382.489