Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0125 ATGGGTGCTGCGAAAGGAGAGAACGTGTGTGCCTCGCCGTCGCCGGAAATCTCGAAGGAAGTGGACCCCAGCCATGCCTCCGAGACCTTGCGCATCGTTAACGCTATGGGGGCTGCCACCCCCATTCCCGCTAACTGCAACGCGCGTGGCTTCTACGACGCTTTCCTCCGAAGCTTCATCAAGGTCGATCACATCCAACGTGGAAGAATTTCATGCACTGTTGTTGCCAAACCACCCATCTGTAATCGCTATGGAACTCTGCATGGAGGTTCTGTTGGGTCCTTGGTTGAGATTTTATCGAATGCTTGTGCTAGAACTGTAGTTGCCAAGGACAAGGAACTTTTTCTTGGGGAAATCAGCATTTCTTACCTCTCTGCCACTCCAGCAAATGAAGAAGTGCTAGCTAATGCCTCTGTGGTGAAGACTGGGAGAAATTTGACTGTTGTTGCAGTTGAATTTAAACTGAAGAAAGCTGGGAATTTGCTCTATATTACTCATTCTACCTTCTATAACATGCCAGTTGCCAGTTTATGA 534 0.485 MGAAKGENVCASPSPEISKEVDPSHASETLRIVNAMGAATPIPANCNARGFYDAFLRSFIKVDHIQRGRISCTVVAKPPICNRYGTLHGGSVGSLVEILSNACARTVVAKDKELFLGEISISYLSATPANEEVLANASVVKTGRNLTVVAVEFKLKKAGNLLYITHSTFYNMPVASL* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0125 177 PANTHER OS07G0462700 PROTEIN 11 177 - -
Gso3g0125 177 Gene3D Hotdog Thioesterase 42 173 - -
Gso3g0125 177 CDD PaaI_thioesterase 60 170 - -
Gso3g0125 177 Pfam Thioesterase superfamily 84 157 IPR006683 -
Gso3g0125 177 PANTHER THIOESTERASE SUPERFAMILY MEMBER-RELATED 11 177 IPR039298 GO:0047617
Gso3g0125 177 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 60 170 IPR029069 -
Gso3g0125 177 MobiDBLite consensus disorder prediction 1 23 - -
Gso3g0125 177 TIGRFAM unchar_dom_1: uncharacterized domain 1 60 152 IPR003736 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0125 Gso-Chr3 1510468 1513862 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0125 K17362 - gmx:100788965 350.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0658 7 6993145 6996260 Gso3g0125 3 1510468 1513862 GST