Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0020 ATGAAGCAATCAAAGGATCCGTTCGAAGCAGCGTTCGAGGAATCGCCGCCAGAATCCCCAACGGCTACGGAGACAGAGGCAGAGACGCAAAACCCTACTCCTCCTCCTCCTCCTCCTCCTCCTCCTTCTTCTTTTTCTGGTGTTGCTGTAGTAGCACTGAATCCACAACAGCCTCAGAATCAGAAAGTGAAGAACAAAGACAATGAGGAAGAGGAGGAGGAGGAGGACAACATGGACGTGGAGCTCGCCAAGCTCCCTTCCACCGGCGACCCTCACAAAATGGCCAAGATGCAGGCCATTTTGTCGCAATTCACCGAAGAGCAGATGAGTCGATACGAGTCCTTCCGGAGGGCTGGCTTTCAGAAAGCCAACATGAAAAGGTTATTGGCTAGCATCACTGGGACCCAGAAAATTTCTGTGCCCATGACGATTGTTGTATCGGGCATTGCAAAAATGTTTGTTGGTGAAGTTGTTGAAACAGCTAGAATAGTTATGAAAGAGAGGAAGGAATCTGGACCAATCCGGCCTTGTCATCTGAGAGAAGCATATAGACGACTAAAGCTTGAAGGAAAAGTCTTTAAGAGATCATCCTCGAGGCTCTTCCGGTAG 609 0.491 MKQSKDPFEAAFEESPPESPTATETEAETQNPTPPPPPPPPPSSFSGVAVVALNPQQPQNQKVKNKDNEEEEEEEDNMDVELAKLPSTGDPHKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASITGTQKISVPMTIVVSGIAKMFVGEVVETARIVMKERKESGPIRPCHLREAYRRLKLEGKVFKRSSSRLFR* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0020 202 Coils Coil 63 83 - -
Gso3g0020 202 MobiDBLite consensus disorder prediction 30 45 - -
Gso3g0020 202 CDD TAF11 104 187 IPR006809 GO:0005634|GO:0006367
Gso3g0020 202 Gene3D Histone, subunit A 104 193 IPR009072 GO:0046982
Gso3g0020 202 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 11-RELATED 1 202 IPR045127 GO:0005669|GO:0006367|GO:0051123
Gso3g0020 202 MobiDBLite consensus disorder prediction 1 91 - -
Gso3g0020 202 PANTHER TAFII28-LIKE PROTEIN-RELATED 1 202 - -
Gso3g0020 202 Pfam hTAFII28-like protein conserved region 100 185 IPR006809 GO:0005634|GO:0006367
Gso3g0020 202 SUPERFAMILY Histone-fold 104 192 IPR009072 GO:0046982
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0020 K03135 - gmx:100305481 253.832