Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0017 ATGGCGCAAAGAGTACTAGTAGGAGAGATGTTGGTGTTGGTGTTATTGTTGTTGGCACCAAAGACAAAGGCAAAGGCAATGAGCATAACAAGAGGTCAAAACAATAAAAGCAGCAGGGGCAAAGAGTCCTCTGGTTCTAGTGATGAGGGGGGTGCAATTAGCTTTTGTTTGAGTTGGAGATTGGCAGTGGAGGCAAACAATGTGGTTGCATGGCCAACAGTTCCACCTCAGTGTTCCCGATATGTTGAGACTTACATGATCAATGGCCAGTATGACCGGGACTTGGATTTGATTGTGGAGGAAATCTTGGCTTATGTCAACCAAACTTTTCTCCTTGGGGATGCCATGGATGCTTGGATTTTGGATGTTGATGACACTTGCATCTCCAACATCTATTATTACAAAGGCAAGAAATATGGGTGTGATCCGTATGACCCATTTGCCTTTAGGACGTGGGCCATGAAAGGAGGGTGCCCTGCAATTCCTTCCGTACTAAGGTTGTTTAACATATTAGTAAATAAAGGATTCAAAGTATTTTTACTCACCGGAAGAGATGAAGAGACCCTTGGTCAAGTTACCCGGAACAACTTGCACAATCAAGGATTCATTGGCTATGAACGTCTTATTTTGAGGAGTTCAGCATATAAAGGGAAAAGTGCAATGAAATACAAATCCGATGTACGAAAGCAGTTACAAGACCAAGGTTACAGGATATGGGGGAATGTGGGAGACCAGTGGAGTGATATTCAGGGAGACTATTTAGGGAACCGTACTTTCAAGCTACCTAATCCCATGTACTTTGTTCCCTAA 810 0.4321 MAQRVLVGEMLVLVLLLLAPKTKAKAMSITRGQNNKSSRGKESSGSSDEGGAISFCLSWRLAVEANNVVAWPTVPPQCSRYVETYMINGQYDRDLDLIVEEILAYVNQTFLLGDAMDAWILDVDDTCISNIYYYKGKKYGCDPYDPFAFRTWAMKGGCPAIPSVLRLFNILVNKGFKVFLLTGRDEETLGQVTRNNLHNQGFIGYERLILRSSAYKGKSAMKYKSDVRKQLQDQGYRIWGNVGDQWSDIQGDYLGNRTFKLPNPMYFVP* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0017 269 CDD HAD_VSP 82 268 - -
Gso3g0017 269 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 52 268 IPR005519 -
Gso3g0017 269 MobiDBLite consensus disorder prediction 29 49 - -
Gso3g0017 269 SUPERFAMILY HAD-like 99 266 IPR036412 -
Gso3g0017 269 PANTHER HAD SUPERFAMILY, SUBFAMILY IIIB ACID PHOSPHATASE 7 269 - -
Gso3g0017 269 TIGRFAM plant-AP: plant acid phosphatase 53 269 IPR010028 GO:0003993
Gso3g0017 269 PIRSF VSP 2 269 IPR014403 -
Gso3g0017 269 Gene3D - 52 269 IPR023214 -
Gso3g0017 269 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 7 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0017 Gso-Chr3 180186 183584 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0017 - - gmx:100777758 511.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g0017 3 180186 183584 Gso3g0017 3 180186 183584 ECH