Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0016 ATGAACCAAAAGGGTCATGAGAAGAAAATTGAAAAACCAGATGATGAGTCAGAGAGCTATGGTCGGAGTTGGAGGCTAACGGTTGAAGCAAACAATGCGCGTCCATGGAGGATTGTTCCAGACAACTGCTACAACCACCTTCAGAACTACATGTCTGGTGGACAATACCAGCTTGACCTTAACCTCGTCGTCCAACATATCTTGTCCTATGCCCATGAGATTCCTCTTGCTGCCGACGGCATGGATGCCTGGATTTTGGATGTTGATGACACTTGCATCTCCAACATTGATTATTACAAAGGAAGGCGATTCGGGTGCGACCCATTTGACTCAGCGATATTCAAGGCATGGATTATGAAGGGAAAGTGTCCCGCAAATCCTGCCGTGCTAGAACTGTTTAACGCCTTGATAAAGAAAGGATTCAAAGTGTTCTTGCTTACTGGTAGAGACCAAGCAACTCTCGCTCAAATCACCACTAACAACTTGCGTAACCAGGGATTCATCGGCTACCAACGTCTTATTCTCAGGAGTGCTCAGTACAAAGGACAAAGTGCAGTGAGATACAAGTCAGCAATTCGGAAGGAGATAGAAGGAGAAGGGTACAGGATACGGGGAAATGTGGGAGACCAGTGGAGTGATCTTCAAGGAGAGTGTTTGGGCAATCGTACATTCAAGCTCCCTAATCCCATGTATTTCATTTCTTGA 705 0.4582 MNQKGHEKKIEKPDDESESYGRSWRLTVEANNARPWRIVPDNCYNHLQNYMSGGQYQLDLNLVVQHILSYAHEIPLAADGMDAWILDVDDTCISNIDYYKGRRFGCDPFDSAIFKAWIMKGKCPANPAVLELFNALIKKGFKVFLLTGRDQATLAQITTNNLRNQGFIGYQRLILRSAQYKGQSAVRYKSAIRKEIEGEGYRIRGNVGDQWSDLQGECLGNRTFKLPNPMYFIS* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0016 234 PIRSF VSP 1 234 IPR014403 -
Gso3g0016 234 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 16 232 IPR005519 -
Gso3g0016 234 TIGRFAM plant-AP: plant acid phosphatase 15 233 IPR010028 GO:0003993
Gso3g0016 234 CDD HAD_VSP 49 233 - -
Gso3g0016 234 PANTHER PLANT ACID PHOSPHATASE 1 234 - -
Gso3g0016 234 SUPERFAMILY HAD-like 75 232 IPR036412 -
Gso3g0016 234 Gene3D - 17 234 IPR023214 -
Gso3g0016 234 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 1 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0016 Gso-Chr3 172425 175597 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0016 - - gmx:547483 489.574