Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2578 ATGGGTGAGGAGGAAATAGATGATTCTCCCTTGATTCAAGGTTTTCCTTCCGGCGACGTGCCATTTAGGAGAACTGGTAATGTAGAGAGGGCAGTAGCACATATAATAACTGGTGTGATAGGGGCAGGGGTGCTGTCTCTAGCATGGTCTGTGGCACAGTTAGGGTGGATTGCTGGTCCTTTTATCATCATAGTCTTTGCAGGAACAACCTTTCTTTCAGCAAACCTTCTTTCTGACTGCTACAGATTCCCTCATCCTCTCTATGGCAACATTAGGTGCCCCTCCTACATTGATGCTGTCAAGGTTTACCTAGGAGACTCAAGGCAAAAGGTGTGTGGAGTGCTGGTGCATGCGAGCTTATATGGTGCCACCACGGCCTATGTCATTACATCTGCCACCAGCATCAGAGCAATACTGAAATCAAATTGTTATCACAAGGAAGGGCATCAGGCTCCTTGTAAATATGGGGATGCAGTATATATGATGCTGTTTGGACTAGTTCAGGTCATAATGTCATTCATACCAGATCTCCACAACATGGCATGGGTTTCAATTGTTGCGGCCATAATGTCCTTTACATACTCATCTATTGGACTTGGACTTGGCATCACAACAGTAATAGAAAATGGAAGAATTATGGGTAGTTTAACAGGAGTACCGGCTTCAAATATTGCTGACAAGTTATGGTTAGTCTTCCAAGGAATTGGTGATATTGCCTTTGCCTATCCATACACAGTCATCCTCCTTGAGATACAGGACACTCTAGAGTCTCCTCCACCAGAAAACAAGACCATGAAAAAGGCCTCCATGATTGCTATCCTCATTACAACATTCTTCTACCTCTGCTGTGGATGCTTTGGATATGCGGCTTTTGGAAATCAAACACCAGGAAACCTCTTGACAGGGTTTGGATTTTACGAGCCTTACTGGCTCATTGACTTTGCCAATGCTTGCATTGTTCTTCACTTGGTAGGAGGATATCAGATTTACAGTCAGCCGATATATGGTGCTGTTGACAGATGGTGTTCAAAAAGATACCCCAACAGTGGATTTGTGAATAATTTCTACCAATTGAAACTGCCTCGGTTGCCAGCTTTTCAGCTAAACATGTTCAGGATATGTTTTAGAACAGCTTATGTGGTTTCCACGACTGGACTTGCGATCCTATTTCCTTACTTCAATCAAGTTATAGGAGTGTTAGGAGCCTTAGGCTTTTGGCCATTGGCTATATATTTCCCGGTAGAGATGTACTTTGTGCAGAGGAAAGTTGAAGCTTGGTCTAGAAAATGGATTGTCCTCAGGACCTTCAGCTTTATTTGCTTTCTGGTGTCATTACTGGGTCTCATTGGATCACTTGAAGGAATCATAAGCGAGAAACTAAGCTAA 1386 0.4329 MGEEEIDDSPLIQGFPSGDVPFRRTGNVERAVAHIITGVIGAGVLSLAWSVAQLGWIAGPFIIIVFAGTTFLSANLLSDCYRFPHPLYGNIRCPSYIDAVKVYLGDSRQKVCGVLVHASLYGATTAYVITSATSIRAILKSNCYHKEGHQAPCKYGDAVYMMLFGLVQVIMSFIPDLHNMAWVSIVAAIMSFTYSSIGLGLGITTVIENGRIMGSLTGVPASNIADKLWLVFQGIGDIAFAYPYTVILLEIQDTLESPPPENKTMKKASMIAILITTFFYLCCGCFGYAAFGNQTPGNLLTGFGFYEPYWLIDFANACIVLHLVGGYQIYSQPIYGAVDRWCSKRYPNSGFVNNFYQLKLPRLPAFQLNMFRICFRTAYVVSTTGLAILFPYFNQVIGVLGALGFWPLAIYFPVEMYFVQRKVEAWSRKWIVLRTFSFICFLVSLLGLIGSLEGIISEKLS* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2578 461 Pfam Transmembrane amino acid transporter protein 25 456 IPR013057 -
Gso2g2578 461 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 6 460 - -
Gso2g2578 461 PANTHER OS05G0424000 PROTEIN-RELATED 6 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2578 Gso-Chr2 50025804 50033351 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2578 19 456 Organic Solute Cotransporters AT5G09220 50.113 3.13e-170 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2578 K24917 - gmx:100786621 784.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0092 14 827254 833785 Gso2g2578 2 50025804 50033351 GST
Gso18g0613 18 6675446 6679359 Gso2g2578 2 50025804 50033351 PCT
Gso8g2784 8 45586487 45591296 Gso2g2578 2 50025804 50033351 PCT
Gso2g2578 2 50025804 50033351 Gso18g0614 18 6689133 6693951 PCT
Gso2g2578 2 50025804 50033351 Gso8g2783 8 45574061 45581399 PCT