Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2078 ATGTCGTTACTCTCCGATCTTATCAACCTTAACCTCTCCGACATCACCGATAAGGTGATCGCCGAGTACATATGGGTTGGTGGATCTGGCATGGATATGAGGAGCAAAGCAAGGACTCTCTCGGGACTGGTTAATGACCCTTCCAAGCTTCCCAAGTGGAACTATGATGGTTCCAGCACTGGTCAAGCTCCTGGACAAGATAGTGAAGTGATCTTATATCCACAAGCAATTTTTCGGGATCCATTCAGGAGGGGTAACAATATCCTGGTTATGTGTGATGCTTACACTCCTGCTGGGGAACCCATTCCTACCAACAAGAGAAATAAAGCTGCAAAGATATTCAGTAATCCGGATGTTGCTGCTGAAGAACCCTGGTATGGTCTTGAGCAGGAATATACATTATTGCAGAAAGATGTCCAATGGCCTCTTGGATGGCCTCTTGGTGGGTTTCCTGGGCCCCAGGGACCATACTATTGTGGAACTGGTGCTAACAAGGCTTTTGGGCGTGATATTGTTGACTCACATTACAAAGCATGTATTTATGCGGGAATTAACATAAGTGGAATCAATGGAGAAGTGATGCCCGGTCAGTGGGAATTCCAAGTTGGTCCATCGGTTGGCATCTCTGCTGCTGACGAGTTGTGGGTTGCTCGTTACATTTTGGAGAGGATCACCGAGATTGCTGGAGTGGTGCTTTCCTTTGACCCTAAACCAATTCAGGGTGATTGGAATGGTGCTGGTGCTCACACAAATTACAGTACCAAGTTGATGAGAAACGATGGTGGCTATGAAATCATCAAAAAAGCAATTGCTAAGTTGGAAAAGAGGCACAAAGAGCACATTGCTGCTTACGGAGAAGGCAATGAACGTCGTTTGACCGGACGACACGAGACGGCTGACATGAACACCTTTTTATGGGGTGTTGCAAACCGTGGTGCTTCTATTAGGGTAGGGAGAGACACTGAAAAGGCAGGGAAGGGATACTTTGAAGATAGGAGGCCTGCCTCTAACATGGACCCTTATGTGGTCACTTCCATGATTGCTGAGACAACTATTCTTTGGAAACCATAA 1071 0.4641 MSLLSDLINLNLSDITDKVIAEYIWVGGSGMDMRSKARTLSGLVNDPSKLPKWNYDGSSTGQAPGQDSEVILYPQAIFRDPFRRGNNILVMCDAYTPAGEPIPTNKRNKAAKIFSNPDVAAEEPWYGLEQEYTLLQKDVQWPLGWPLGGFPGPQGPYYCGTGANKAFGRDIVDSHYKACIYAGINISGINGEVMPGQWEFQVGPSVGISAADELWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHTNYSTKLMRNDGGYEIIKKAIAKLEKRHKEHIAAYGEGNERRLTGRHETADMNTFLWGVANRGASIRVGRDTEKAGKGYFEDRRPASNMDPYVVTSMIAETTILWKP* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2078 356 ProSitePatterns Glutamine synthetase signature 1. 55 72 IPR027302 -
Gso2g2078 356 PANTHER GLUTAMINE SYNTHETASE 1 356 - -
Gso2g2078 356 PANTHER GLUTAMINE SYNTHETASE 1 356 - -
Gso2g2078 356 ProSiteProfiles Glutamine synthetase (GS) beta-grasp domain profile. 19 99 IPR008147 GO:0004356|GO:0006542|GO:0006807
Gso2g2078 356 Pfam Glutamine synthetase, beta-Grasp domain 21 97 IPR008147 GO:0004356|GO:0006542|GO:0006807
Gso2g2078 356 Gene3D - 1 103 IPR036651 GO:0004356|GO:0006542|GO:0006807
Gso2g2078 356 Pfam Glutamine synthetase, catalytic domain 168 346 IPR008146 GO:0004356|GO:0006807
Gso2g2078 356 ProSitePatterns Glutamine synthetase putative ATP-binding region signature. 237 253 IPR027303 -
Gso2g2078 356 SMART Gln_synt_C_2 103 351 IPR008146 GO:0004356|GO:0006807
Gso2g2078 356 ProSiteProfiles Glutamine synthetase (GS) catalytic domain profile. 106 356 IPR008146 GO:0004356|GO:0006807
Gso2g2078 356 Gene3D Glutamine synthetase/guanido kinase, catalytic domain 104 304 - -
Gso2g2078 356 Gene3D Glutamine synthetase/guanido kinase, catalytic domain 305 356 - -
Gso2g2078 356 SUPERFAMILY Glutamine synthetase/guanido kinase 104 352 IPR014746 GO:0003824
Gso2g2078 356 SUPERFAMILY Glutamine synthetase, N-terminal domain 17 102 IPR036651 GO:0004356|GO:0006542|GO:0006807
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2078 Gso-Chr2 45372735 45377036 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2078 K01915 - gmx:547621 701.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1801 14 50349445 50353572 Gso2g2078 2 45372735 45377036 GST
Gso2g2078 2 45372735 45377036 Gso18g0364 18 3536911 3541296 PCT
Gso2g2078 2 45372735 45377036 Gso13g1250 13 27658829 27663151 PCT