Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1049 ATGGATCGAATTAGTGATTTACCAAGTCATTTGATTGATTTTATTCTACAACGCTTGCAATTGCAAGATGTGGTTAGAACGAGTTTATTATCAAGTAAATGGAGATATAAGTGGACTTCTGTCCCCAAACTTGATTTTTCAAATGATTTTTTTCAAAAGTGTAGGGATTTAGAACTTCATGAAGTTTCAAGTACTATTACAGAAATTCTTTTGATTCACGATGGACCATTAGATGAGTTTGTTCTTTGCATTCCCGAAAATGTGCCAATCAAAATTGAATCCCTTAACAAGTGGATTCTTTGTTTATCAAGAAAAGGGATTAAAGAACTTGAGCTTTGGAACCTTCAAACAGATCCTTGTGAAACACCATCTCATATCTTCTCTTGTCAGGGATTGACGTATCTTCAACTTCAGAATTTTAAATTATCAACTGTGCCTAATTTTTCTAGCTTTAAAAGTTTGGTTTACCTTATCTTAGTTGATATTATATTTGAGTCCAGTGCAATTGATCTTATGTTTGGTTGTCCATCACTTGAGATGCTCTCCATTTCATACTGTTCTGGTTTTGAGTGTATCAATGTGTCCTCTCCTGCTCTCGAAGTCTTACATGTACAAGGTGAACAAGTTATCAAGTCAATTTATTTGGAGAAAGCTAAAAGAATGACTGATGTTTCACTCATGGCTGATAATCCTGGGGATAACTTTGACATGGATACAATATCAAATTTGATCAAAGGCTTGTCGGAAGTTGAAAGCATGTGTTTCACAGAAGGTTACATTCAGATCTTTTCCACAGCTTATACCCTTCCAAAGAGTTTGCAAAAACCACTCAACTGCTTAGAATCTCTAGAATTGGAAGGTGTGAATTTCGACGATACAACAGAGCTTCTGTTTGTTATTTCCCTACTTAAAAGTTCTCCAAACCTAGAGAAACTTTTTATACAGGGTAATTATATCGCTGGCGTGGATCTGCCACAAATATTGGAGAAGTCAAAGTACAATGGTTGTTGCCTTAGTCACCTTCTGACTGTGCATATAAAAGCTTACAAACCCTGTGAGAATACAATGAACTTCATACGTTTTTTGCTGGCTAATTCCACATCATTGGAGCTCCTTACTTTCTACATTGTTCCTGCTCATGATCATCAACAACATCAATATTCCATATCTAGTGTTGGACGAGAACTGAAACAAATGGCACGAGCTTCAAAAAGTGCAGTAGTTGAGTTCATTGATTTATCATTTGATTGA 1251 0.3565 MDRISDLPSHLIDFILQRLQLQDVVRTSLLSSKWRYKWTSVPKLDFSNDFFQKCRDLELHEVSSTITEILLIHDGPLDEFVLCIPENVPIKIESLNKWILCLSRKGIKELELWNLQTDPCETPSHIFSCQGLTYLQLQNFKLSTVPNFSSFKSLVYLILVDIIFESSAIDLMFGCPSLEMLSISYCSGFECINVSSPALEVLHVQGEQVIKSIYLEKAKRMTDVSLMADNPGDNFDMDTISNLIKGLSEVESMCFTEGYIQIFSTAYTLPKSLQKPLNCLESLELEGVNFDDTTELLFVISLLKSSPNLEKLFIQGNYIAGVDLPQILEKSKYNGCCLSHLLTVHIKAYKPCENTMNFIRFLLANSTSLELLTFYIVPAHDHQQHQYSISSVGRELKQMARASKSAVVEFIDLSFD* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1049 416 Pfam F-box domain 4 40 IPR001810 GO:0005515
Gso2g1049 416 Gene3D Ribonuclease Inhibitor 211 374 IPR032675 -
Gso2g1049 416 PANTHER CYCLIN-LIKE F-BOX 1 384 - -
Gso2g1049 416 PANTHER F-BOX/RNI/FBD-LIKE DOMAIN PROTEIN 1 384 - -
Gso2g1049 416 Pfam FBD 336 374 IPR006566 -
Gso2g1049 416 ProSiteProfiles F-box domain profile. 1 54 IPR001810 GO:0005515
Gso2g1049 416 SMART 9598neu4hmm 335 411 IPR006566 -
Gso2g1049 416 Gene3D Ribonuclease Inhibitor 20 210 IPR032675 -
Gso2g1049 416 SUPERFAMILY RNI-like 16 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1049 Gso-Chr2 12603994 12605968 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1049 - - gmx:102667792 832.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1049 2 12603994 12605968 Gso2g1049 2 12603994 12605968 ECH