Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1048 ATGACGGCCCAGTTCCAGAAGATTGTTGTTGCTGACCACATGGATCGAATTAGTGATTTACCAAGTCATTTGATTGATTTTATTCTACAACGCTTGCCCCTGCAAGATGTTGTTAGAACGAGTTTATTATCAAGTAAATGGAGATATAAGTGGACTTCTATCCCCAAACTTGATTTTTCAAATGATTTTTTTCAAAAGTGTAGGGATTTAGAACTTCATGAAGTTTCAAGTACTATTACAGAAATTCTTTTGATTCACGATGGGCAATTAGATGAGTTTGTTCTTTGCATTCCCGAAAATGTGCCAATCAAAATTGAATCCCTTAATAAGTGGATTCTTTGTTTATCAAGAAAAGGGATTAAAGAACTTGAGCTTTGGAACCTTCAAACAGATCCTTGTGAAACACCATCTCATATCTTCTCTTGTCAAGGATTGACGTATCTTCAACTTCACAATTTTAAATTATCAACTGTGCCTAATTTTTCTAGCTTTAAAAGTTTGGTTTACCTTATGTTAGTTGATATTATATTTGAGTCCAGTGCAATTGATCTTATGTTTGGTTGTCCATCACTTGTGATGCTCTCCATTTGTTACTGTTCTGGTTTTGAGTGTATCAATGTGTCCTCTCCTGCTCTCGAAGTCTTACATGTACAAGGTGAACAAGTTATCAAGTCAATTTGTTTGGAGAAAGCTAAAAGAATGACTGATGTTTCACTCATGGCTGATAATCCTGGGGATAACTTTGACATGGATACAATATCAAATTTGATCAAAGGCTTGTCAGAAGTTGAAAGCATGTGTTTAACAGAAGGTTATATTCAGATCTTTTCCACAGCTTATACCCTTCCAAAGAGTTTGCAAAAACCACTCAACTGCTTAGAATCTCTAGAATTGGAAGGTGTGAATTTCGACGATACAACAGAGCTTCTGTTTGTTATTTCCCTACTTAAAAGTTCTCCAAACCTAGAGAAACTTTTTATACAGGGTAATTATAGCACTGGCGTGGATCTGCCACAAATATTGGAGAAGTCAAAGTACAATGGTTGTTGCCTTAGTCACCTTCTGACTGTGCACATAAAAGCTTACAAACCCTGTGAGAATACAATGAACTTCATACGTTTTTTGCTGGCTAATTCCACATCATTGGAGCTCCTTACTTTCTGCATTATTCCTGCTCATGATCAACAACATCATTCCATATCTAGTGTTGGACGAGAATTGGAACAAATGGCACGAGCTTCAAAAAGTGCAGTAGTTGAGTTCATTGATTTATCATTTGATTGA 1284 0.3606 MTAQFQKIVVADHMDRISDLPSHLIDFILQRLPLQDVVRTSLLSSKWRYKWTSIPKLDFSNDFFQKCRDLELHEVSSTITEILLIHDGQLDEFVLCIPENVPIKIESLNKWILCLSRKGIKELELWNLQTDPCETPSHIFSCQGLTYLQLHNFKLSTVPNFSSFKSLVYLMLVDIIFESSAIDLMFGCPSLVMLSICYCSGFECINVSSPALEVLHVQGEQVIKSICLEKAKRMTDVSLMADNPGDNFDMDTISNLIKGLSEVESMCLTEGYIQIFSTAYTLPKSLQKPLNCLESLELEGVNFDDTTELLFVISLLKSSPNLEKLFIQGNYSTGVDLPQILEKSKYNGCCLSHLLTVHIKAYKPCENTMNFIRFLLANSTSLELLTFCIIPAHDQQHHSISSVGRELEQMARASKSAVVEFIDLSFD* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1048 427 Pfam FBD 349 387 IPR006566 -
Gso2g1048 427 ProSiteProfiles F-box domain profile. 14 67 IPR001810 GO:0005515
Gso2g1048 427 PANTHER F-BOX/RNI/FBD-LIKE DOMAIN PROTEIN 1 400 - -
Gso2g1048 427 PANTHER CYCLIN-LIKE F-BOX 1 400 - -
Gso2g1048 427 Pfam F-box domain 17 54 IPR001810 GO:0005515
Gso2g1048 427 SUPERFAMILY RNI-like 24 394 - -
Gso2g1048 427 SMART 9598neu4hmm 348 422 IPR006566 -
Gso2g1048 427 Gene3D Ribonuclease Inhibitor 13 387 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1048 Gso-Chr2 12578405 12580356 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1048 - - gmx:102670301 856.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1048 2 12578405 12580356 Gso2g1048 2 12578405 12580356 ECH