Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1024 ATGAAAAGCCAGTATCTCATCACCCTTTGTTTTGTGTTAACTTTGCCTTTTCCCCTATCATCAACAACGAACTCATATGAGTCATCATGTCACAAAAAAAAGTTTCCAGCTTTGTATGTTTTTGGTGATTCCCTAATTGATTGTGGGAATAACAATCATCTTCCGAGCGGTGGAGCAGATTATCTTCCTTATGGTATAGATTTTATGGGTGGCAACACACCAACCGGTCGAGCCACTAATGGAAAAACCGTGGCTGATTTTCTTGCTATGCATCTAGGACTACCCTTTGTCCATCCTTACTTGGATCTTACAAATCATCAAAGGAACAAAATCAGAACAGGCATTAATTATGCCTCTGGTGGGTCTGGCATTCTTCCCGACACTAACAACGTGACGTCTTTGACGCTTGATAAGCAAATTAAGTTCTTCCATAGGACTGTTAAGCATAATTTGCATAAGATGTTCAATGAGAAAGAAAAAATGGAGAAGCATTTATCTGAATCCTTGTTTTTTGTCTCTACGGGGGTGAATGATTACTTCCATAATGGGACCTTCCGCGGCAACAAAAACCTTTCTTTATTCCTGCTTAATGAATTCACCCTACGCATCCAGAGAATATATGATCTAGGAGCAAGAAAATTTTTCGTGAACAACATTCCCCCAGCAGGTTGCTTTCCATCAAAAGCTATCCGAGAAAGACCAAGAGGAAATTGTGATGAGAAAATAAACAAAGCTATCAGCTTTTACAATAGAAGGTTACCTGAAGTGCTCCATGAGTTGCAATCACTGCTTCCTGGCTTCAGCTTTGTACATGCAGATCTTTTCGGATTCTTTAAGGAGCTAAGGGAAACCGGAAAGAGTTATGGGATAGTGGAAACATGGAAACCTTGCTGCCCTAACACCATTTATGGTGATCTCCAATGCCATCCCAACACTGTTCCTTGTCCAAACAGAGACACTCATCTTTTCTGGGATGAACACCCCACACAAATCGTAAACCAAATATATGCAAGGCTTTGCTTCATTGAGGGGACCATTTGCAAGTCCTCGGACCTCAAACTAATCTAG 1068 0.4082 MKSQYLITLCFVLTLPFPLSSTTNSYESSCHKKKFPALYVFGDSLIDCGNNNHLPSGGADYLPYGIDFMGGNTPTGRATNGKTVADFLAMHLGLPFVHPYLDLTNHQRNKIRTGINYASGGSGILPDTNNVTSLTLDKQIKFFHRTVKHNLHKMFNEKEKMEKHLSESLFFVSTGVNDYFHNGTFRGNKNLSLFLLNEFTLRIQRIYDLGARKFFVNNIPPAGCFPSKAIRERPRGNCDEKINKAISFYNRRLPEVLHELQSLLPGFSFVHADLFGFFKELRETGKSYGIVETWKPCCPNTIYGDLQCHPNTVPCPNRDTHLFWDEHPTQIVNQIYARLCFIEGTICKSSDLKLI* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1024 355 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 355 - -
Gso2g1024 355 Pfam GDSL-like Lipase/Acylhydrolase 38 337 IPR001087 GO:0016788
Gso2g1024 355 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE-RELATED 1 355 - -
Gso2g1024 355 Gene3D SGNH hydrolase 23 343 IPR036514 -
Gso2g1024 355 CDD SGNH_plant_lipase_like 36 341 IPR035669 -
Gso2g1024 355 SUPERFAMILY SGNH hydrolase 37 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1024 Gso-Chr2 12180212 12183099 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1024 36 337 Acyl Lipid Metabolism Gene Families AT4G10950 35.443 3.35e-47 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1024 - - gmx:100781124 746.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1024 2 12180212 12183099 Gso2g1024 2 12180212 12183099 ECH