Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0893 ATGAAGACGAATTTTCACATAGAAGCGTTCAAGAACCGAGTAAGCATTGATCCAAAATATTTTGACAAGACATGGAGCGTTCTGGAACACGCAATTCATGAAATATATAACCAGAATGATCGTCATCTCAGCTTTGAAGAGCTTTACAGAAATGCATACAATATGGTTCTTCTCAACTTTGGTGAGAGGCTATACTCAGGACTGGTTGCCACCATGACTGCTCATCTAAAAGAGATAGCTAGATCTATTGAAGCCACTCAAGAGGGTTCCTTTCTGGAAGAAATGAACAGAAAATGGAATTCTCACAATAAGGAATTACAATTGATTGAAGACATTCTGATGTACATGGATAGGACTTACGTCCCAAAAAACGGGAAAATCTCTGTTCACGAACTTGGCCTTAAACTGTGGAGAGAAAATGTTATATGTTCAAACCAGATAAGGACCCGACTGTTAAATACACTTTTGGAAATGGTGTGCAGTGAACGTGCAGGTGAAGTTATTAACAGAGGACTGTTTAGAAATATAACAAAGATGCTAATGGATTTAGGTCCTTCTGTTGTTTATGGGGAAGAATTTGAGACTCATTTTCTTCAAGTTTCAGCTGAGTTCTACCAGTTAGAATCCCAGAAGTTTATTGAGTGTTGTGCTTGTGGGGATTATCTGAAGAAAGCTGAGAGTTGTCTGAAAGAGGAAATGGATAGAGTGAGCCATTACTTGGATCCCAGTACTGAAAAGAAGATTACTGATGTGGTGGCTAAGGAGATGATTGAAAATCACATGCTTACATTAATACATATGGAGAATTCAGGGTTAGTAAGCATGCTTTGTGAGGATAAATACGAAGATTTGGGTCGAATGTATAACTTGTTCTGCCGTGTTACTGATGGTCTAGCAAAAATACTTGAAGTGATGACTTCACACATTAGAGAGTCGGGTAAAAAGCTTGTCACGGATCCTGAAAGGTTGAAGGATCCTGTTGAATTTGTGCAGAGGCTCTTAGATGAGAAACATAAGTATGACAAGATTATAAATTTTGCATTTAACGACGATAAGTTGTTCCAAAATGCTTTCAAATCCTCCTTTGAATACTTCATTAACTTGAATCCCCGTTCTCCAGAGTTCATTTCACTCTTTGTAGATGATAAGCTTCGGAAAGGTCTGGAGGGAGTTAGAGAGGATGATGCGGAGATTGCTCTTGACAAGGCGATGATGCTATTCCGGTACTTGCGAGAAAAAGACATGTTTGAGAAGTATTACAATCTGCATATGGCAAAGCGGCTTTTGTCGGGAAAAACAGTTTCTGATGATGCAGAAAGAAGTCTCATAGTCAGGCTCAAGACCGAATGCGGTTATCAATTCACCTCTAAATTAGAGGGCATGCTTACCGACATGAAAACCTCTCTAGAAACAATGCAGGGCTTTTATGCCAGCCACCCTGAGTTAAGTGACAGTCCTACACTTACCGTGCAGGTTTTGACCTCAGGGTTTTGGCCTACTCAATCTACTGTTATATGTAATCTGCCAGCTGAATTATCTGCACTTTGTAAGAAGTTTCGGTCCTATTACCTCGACACACATACTGACGGGAGATTGTCCTGGCAAACTCATATGGGCACAGCAGACATTAAAGCCACCTTTGGTAAAGTTCGCAAACATGAGTTAAATGTCTCCACTTACCAAATGTGTGTCCTCATGCTGTTCAATACTGCTGATAGACTAGGCTACAAGGAAATTGAGCAAGCAACTGAGATTCCGGCTTCGGATCTGAAGAGGTGTCTGCAATCATTGGCTTTGGTTAAGGGAAGAAATGTGCTTAGGAAGGAGCCCATGAGTAAAGATGTAGATGAGGATGATGCTTTCTTTGTAAATGACAAGTTCAATAGCAATCTATACAGGGTAAAAATAGGAACTGTAGTTGCACAAAATGAATCAGAACCTGAGAAACTGGAGACTCGTCGGCAACAAGTGGAGGAGGAGGGCCGAAGGTCCCAGATTGAGGCTGTCATAGTGAGGATAATGAAATCAAGAAAGAAACTTGATCACAGCAATCTCATGGCTGAGGTCACAGAGCAGTTCCATGCAAATCCCACAGAGGTAAAGAAACGGATTGAGTCTCTTGTTGACCGGGATTTTATGGAACGAGATGATAATGACAGACAGTTATATCGATATCTTGCCTAG 2184 0.4066 MKTNFHIEAFKNRVSIDPKYFDKTWSVLEHAIHEIYNQNDRHLSFEELYRNAYNMVLLNFGERLYSGLVATMTAHLKEIARSIEATQEGSFLEEMNRKWNSHNKELQLIEDILMYMDRTYVPKNGKISVHELGLKLWRENVICSNQIRTRLLNTLLEMVCSERAGEVINRGLFRNITKMLMDLGPSVVYGEEFETHFLQVSAEFYQLESQKFIECCACGDYLKKAESCLKEEMDRVSHYLDPSTEKKITDVVAKEMIENHMLTLIHMENSGLVSMLCEDKYEDLGRMYNLFCRVTDGLAKILEVMTSHIRESGKKLVTDPERLKDPVEFVQRLLDEKHKYDKIINFAFNDDKLFQNAFKSSFEYFINLNPRSPEFISLFVDDKLRKGLEGVREDDAEIALDKAMMLFRYLREKDMFEKYYNLHMAKRLLSGKTVSDDAERSLIVRLKTECGYQFTSKLEGMLTDMKTSLETMQGFYASHPELSDSPTLTVQVLTSGFWPTQSTVICNLPAELSALCKKFRSYYLDTHTDGRLSWQTHMGTADIKATFGKVRKHELNVSTYQMCVLMLFNTADRLGYKEIEQATEIPASDLKRCLQSLALVKGRNVLRKEPMSKDVDEDDAFFVNDKFNSNLYRVKIGTVVAQNESEPEKLETRRQQVEEEGRRSQIEAVIVRIMKSRKKLDHSNLMAEVTEQFHANPTEVKKRIESLVDRDFMERDDNDRQLYRYLA* 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0893 727 PANTHER CULLIN 2 727 IPR045093 -
Gso2g0893 727 PANTHER CULLIN-3A-RELATED 2 727 - -
Gso2g0893 727 SUPERFAMILY "Winged helix" DNA-binding domain 653 727 IPR036390 -
Gso2g0893 727 Gene3D Cullin Repeats 370 480 - -
Gso2g0893 727 Pfam Cullin protein neddylation domain 662 719 IPR019559 -
Gso2g0893 727 Gene3D Cullin Repeats 262 369 - -
Gso2g0893 727 Gene3D - 656 727 IPR036388 -
Gso2g0893 727 SUPERFAMILY Cullin repeat-like 18 369 IPR016159 -
Gso2g0893 727 SMART cul_2 401 547 IPR016158 -
Gso2g0893 727 Gene3D Cullin; Chain C, Domain 2 485 642 - -
Gso2g0893 727 Gene3D Cullin Repeats 11 139 - -
Gso2g0893 727 Gene3D Cullin Repeats 141 261 - -
Gso2g0893 727 Pfam Cullin family 25 627 IPR001373 GO:0006511|GO:0031625
Gso2g0893 727 ProSiteProfiles Cullin family profile. 371 598 IPR016158 -
Gso2g0893 727 SMART Cullin_Nedd8_2 658 721 IPR019559 -
Gso2g0893 727 SUPERFAMILY Cullin homology domain 365 637 IPR036317 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0893 Gso-Chr2 10174193 10178605 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0893 K03869 - gmx:100782923 1451.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0893 2 10174193 10178605 Gso2g0893 2 10174193 10178605 ECH