Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0707 ATGGATCAAGGAAGAGATTCTGCACTTACCCAGATGAGGAAATCCGTTGAGAAGCTTGGTTCTTCTGCAGAGGGGTATGGGGACCCTACGTTGATGAGGTTTTTGATAGCTCGATCGATGGAGGTGGATAAAGCAGCAAAGATGTTTCTGCAGTGGAAGAAGTGGAGGTCTGCCATGGTGCCAAATGGATTCATTTCAGAATCTGAAATTCCGGATGAATTGGAAGCAAGGAAGATCTTCTTGCAGGGGTTGTCTCAGGATAAATTCCCTGTCATGATTGTTCAAACCAACAGACATTTTGCTTCCAAGGATCAGATTCAATTCAAGAAATTTGTTGTATATCTACTGGACAAGACAATTGCAAGTGCTTTCAAAGGAAGGGAGATAGGAACTGAAAAGTTGATTGGAATTATTGATCTGCAGAATATTTCATATAAAAATATTGATGCACGTGGGTTAATCACAGGTTTTCAATTTTTACAGGCTTACTACCCAGAACGTTTAGCAAAATGCTATATGTTACACATGCCATGGTTTTTTGTGAGTGTTTGGAAACTAGTTTCTCGCTTCCTAGAGAAGGCTACATTAGAAAAGATTGTAATTGTATCCAATGAGGATGAGACAAGGGAGTTTGTAAGAGAGGTTGGTGAAGAAGTTCTCCCAGAAATGTATGGTGGAAGAGCTAAGCTTGAAGCTATCCAAGATGTTGAATTGCCACCCCTAGAAAACGGAACAACAAACTGA 744 0.4032 MDQGRDSALTQMRKSVEKLGSSAEGYGDPTLMRFLIARSMEVDKAAKMFLQWKKWRSAMVPNGFISESEIPDELEARKIFLQGLSQDKFPVMIVQTNRHFASKDQIQFKKFVVYLLDKTIASAFKGREIGTEKLIGIIDLQNISYKNIDARGLITGFQFLQAYYPERLAKCYMLHMPWFFVSVWKLVSRFLEKATLEKIVIVSNEDETREFVREVGEEVLPEMYGGRAKLEAIQDVELPPLENGTTN* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0707 247 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 67 232 IPR001251 -
Gso2g0707 247 PANTHER SEC14 CYTOSOLIC FACTOR-LIKE 1 239 - -
Gso2g0707 247 SMART sec14_4 73 229 IPR001251 -
Gso2g0707 247 SUPERFAMILY CRAL/TRIO N-terminal domain 4 65 IPR036273 -
Gso2g0707 247 SUPERFAMILY CRAL/TRIO domain 68 230 IPR036865 -
Gso2g0707 247 Gene3D - 1 239 IPR036865 -
Gso2g0707 247 CDD SEC14 71 226 IPR001251 -
Gso2g0707 247 Pfam CRAL/TRIO domain 78 226 IPR001251 -
Gso2g0707 247 PANTHER OS03G0850700 PROTEIN 1 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0707 Gso-Chr2 7399007 7404597 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0707 24 222 Acyl Lipid Metabolism Gene Families AT1G55840 24.074 2.54e-14 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0707 - - gmx:100811048 491.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0707 2 7399007 7404597 Gso2g0707 2 7399007 7404597 ECH