Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0484 ATGGACCAGGCGACCACGTTCAACAAATATGCCTTTGCTTGTGCTGCAGTTGCTTCAATGGTATCCATCATATCTGGCTATGACACGGGTGTTATGAGTGGAGCAATGATATTCATCAAGGATGACATTGGAATCAGTGACACCCAACAAGAGGTTCTAGCAGGAATCTTGAACCTATGTGCATTGGGGGGGTCCTTAGCTGCGGGAAGAACCTCCGATTATATTGGTCGTCGCTACACAATCTTGTTGGCCTCACTCCTCTTCATGGTGGGTGCAATTCTCATGGGGTATGGTCCAAACTATGCAATTCTAATGCTTGGAAGATGCATTGGTGGTGTTGGTGTAGGCTTTGCTCTCATGATAGCACCAGTTTACTCAGCAGAGATTTCTTCTGCATCATCAAGGGGTTTTCTAACCTCGTTACCCGAGCTTTGCATCGGCATTGGGATCTTACTTGGGTACATATCAAACTACTTTTTGGGGAAATTGACTTTGAGGCTGGGATGGAGATTAATGCTTGGGGTAGCAGCTTTTCCCTCGCTGGCTTTGGCCTTGGGGATTCTGGGGATGCCAGAGTCCCCAAGGTGGTTGGCAATGCAAGGTCGCCTAGGGGATGCAAAGAAAGTGTTATTGCGAGTTTCCAACACGGAACACGAGGCCAAGCTTCGGTTCAGAGAAATAAAAGTTGCAATGAGGATTAATGATTGTGATGGTGATGACAACAATGTGAAACCTTCTTACAAGTCACAAGGGGAAGGGGTGTGGAAAGAATTGTTGGTGAGGCCCACACCGGAAGTGCGTTGGATGCTAATTGCGGCAGTGGGGATTCACTTCTTTGAGCATGCAACTGGCATTGAGGCTGTGATGTTGTATAGTCCCAGAATCTTCAAGAAAGCTGGTGTCACAAGCAAGGACAAGCTTCTTCTTGCAACGGTTGGTATTGGCCTCACAAAGATCATTTTCTTGGTCATGGCTTTGTTTTTGCTTGACAAAGTTGGTAGAAGGCGTCTTTTACAAATCAGCACTGGGGGAATGGTTTGTGGGCTCACACTTTTGGGGTTTAGTTTGACAATGGTGGATCGTTCTAGTGAAAAGCTCTTGTGGGCTTTGAGCCTTAGTATTGTGGCCATTTATGCTTATGTTGCTTTCTTTAATGTTGGGCTTGGGCCTGTTACTTGGGTTTATGCGTCGGAGATTTTTCCTTTGAAGTTGAGGGCGCAAGGGGCTAGTATAGGAGTTGCGGTGAATAGAACCATGAATGCTGTGGTTTCCATGAGTTTTATTTCGGTCTACAAAGCGATCACTATAGGTGGGAGCTTTTTCATGTTTGCTGGGATATCTATAGTGGCTTGGGTGTTCTTCTACTTTTTCCTTCCTGAAACCAAAGGTGTGCCCTTGGAAGAGATGGAGATGGTTTTCAGCAAAAAATACAGTGGGAAAAATGTAGCGATAGAAACTGGTCCAAAAAAAGATAATCAAAATTTTACTTCCAAACCCAACCAAATCAAAGAAATGAAGGATAAGGAGACATTCCCTATTGCGAAAAAGGAAGCCTCTGATTCAGGTTTATTCGGAAGAGGAAGCTACAAATTCTGGGCACTAGCTGCCATGCTGCTCTTGGCATTCTGGTCCATGTTCACCGGCACAGTCTCTCTCCGCTGGTCCGGCACCCTCAACACTTTCTCCCACGCGTCCCTTCACGACCACCTCGACGTCCTCGAAATCGAGGAGCGGGAGAAGCTGGTGAGGCACATGTGGGACGTGTACACGAATAACCGTAGGATCAGGTTGCCGCGGTTCTGGGAAAAGGCCTTCGAGGCTGCCTACGAGGATTTGACCAGCGACGCCGCCGATGTTAGAGACGTTGCCGTCGCCGAGATCGTTAACATGTCTCTGCGCTCCTTGGATCTCCAATTGCCTCCTAGAGCACGGAAACTTAGTAAGAATCTCAAGGAAGTTGAGAAAGGCAAAGGAGCAACCTCCGAACGTGCTTAG 1995 0.4717 MDQATTFNKYAFACAAVASMVSIISGYDTGVMSGAMIFIKDDIGISDTQQEVLAGILNLCALGGSLAAGRTSDYIGRRYTILLASLLFMVGAILMGYGPNYAILMLGRCIGGVGVGFALMIAPVYSAEISSASSRGFLTSLPELCIGIGILLGYISNYFLGKLTLRLGWRLMLGVAAFPSLALALGILGMPESPRWLAMQGRLGDAKKVLLRVSNTEHEAKLRFREIKVAMRINDCDGDDNNVKPSYKSQGEGVWKELLVRPTPEVRWMLIAAVGIHFFEHATGIEAVMLYSPRIFKKAGVTSKDKLLLATVGIGLTKIIFLVMALFLLDKVGRRRLLQISTGGMVCGLTLLGFSLTMVDRSSEKLLWALSLSIVAIYAYVAFFNVGLGPVTWVYASEIFPLKLRAQGASIGVAVNRTMNAVVSMSFISVYKAITIGGSFFMFAGISIVAWVFFYFFLPETKGVPLEEMEMVFSKKYSGKNVAIETGPKKDNQNFTSKPNQIKEMKDKETFPIAKKEASDSGLFGRGSYKFWALAAMLLLAFWSMFTGTVSLRWSGTLNTFSHASLHDHLDVLEIEEREKLVRHMWDVYTNNRRIRLPRFWEKAFEAAYEDLTSDAADVRDVAVAEIVNMSLRSLDLQLPPRARKLSKNLKEVEKGKGATSERA* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0484 664 ProSitePatterns Sugar transport proteins signature 1. 68 85 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gso2g0484 664 Gene3D MFS general substrate transporter like domains 3 477 IPR036259 -
Gso2g0484 664 Pfam Sugar (and other) transporter 15 473 IPR005828 GO:0016021|GO:0022857|GO:0055085
Gso2g0484 664 ProSitePatterns Sugar transport proteins signature 1. 325 342 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gso2g0484 664 Pfam Protein of unknown function (DUF1195) 510 641 IPR010608 -
Gso2g0484 664 SUPERFAMILY MFS general substrate transporter 5 470 IPR036259 -
Gso2g0484 664 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 532 602 IPR045262 GO:0015144
Gso2g0484 664 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 5 481 IPR045262 GO:0015144
Gso2g0484 664 ProSitePatterns Sugar transport proteins signature 2. 110 135 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gso2g0484 664 TIGRFAM SP: MFS transporter, sugar porter (SP) family 8 469 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso2g0484 664 ProSiteProfiles Major facilitator superfamily (MFS) profile. 14 462 IPR020846 GO:0022857
Gso2g0484 664 PANTHER POLYOL TRANSPORTER 3-RELATED 532 602 - -
Gso2g0484 664 PANTHER POLYOL TRANSPORTER 3-RELATED 5 481 - -
Gso2g0484 664 CDD MFS_PLT 17 469 IPR044776 GO:0005351
Gso2g0484 664 PRINTS Sugar transporter signature 22 32 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso2g0484 664 PRINTS Sugar transporter signature 105 124 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso2g0484 664 PRINTS Sugar transporter signature 280 290 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso2g0484 664 PRINTS Sugar transporter signature 374 395 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso2g0484 664 PRINTS Sugar transporter signature 397 409 IPR003663 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0484 Gso-Chr2 5095889 5102738 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0484 2 473 Organic Solute Cotransporters AT2G18480 71.398 0.0 668
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0484 - - var:108328789 1061.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0566 11 5054023 5058000 Gso2g0484 2 5095889 5102738 PCT
Gso2g0484 2 5095889 5102738 Gso11g0566 11 5054023 5058000 PCT