Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0333 ATGAAGTTCATGAAACTAGGATCTCGTCCTGATACATTCTACACTGCAGAAGCAGTAAGGTCAGTCTCTTCTGAAGTTTCCAGTGATCTCATAATTCAAGTTAAGGGAAGCAGATATCTTCTTCACAAGTTTCCCTTGCTGTCCAAATGTTTGAGGCTACAAAAGCTATGTTCAGAACCTCCTGATTCGTCTTCTCAGCACCAAATAATCCAACTCCCTGATTTCCCTGGTGGGATGGAGGCATTTGAGTTGTGTGCTAAGTTCTGCTATGGAATAACCATCACTCTCAGCCCTTACAACATTGTGGCGGCACGATGTGGCGCCGAGTATCTTCAGATGACTGAGGAGGTTGAGAAGGGGAACTTAATTCAGAAGCTTGAGGTTTTCTTCAACTCATGCATTCTACGTGGCTGGAAGGACTCTATTGTGAGTCTTCAGTCCACAAAGGCGTTGCCTATGTGGTCTGAGGACTTAGGAATTACAAGCAGATGCATTGAAGCTGTTGCTGCAAAAGTTCTAAGTCACCCTTCTAAGGTGAGTTTGTCACATAGCCATTCACGAAGAGTGAGGGATGATGTGTCTTGCAATGGCAACCAAAGTGTGAGGCATAACAAGTCAGGAAACAAAGGATGGTGGGCTGAAGATTTGGCAGAACTTAGCATAGACTTGTATTGGAGAACCATGATAGCTATCAAATCTGGTGGCAAGATTCCCTCAAATCTTATTGGAGATGCATTGAAAATCTATGCATCTAGGTGGCTACCAAATATTACCAAGAATGGAGGACATATCAAGAAGCAAGCTGTTGCTGACTCAGAATCTGATAACTTGGTTGGTGAAATAGCTTCAAAGCATCGTTTGCTTTTGGAATCAGTGGTGAGCTTGCTTCCTGCTGAGAAAGGTGCTGTTTCGTGTGGCTTTCTCTTGAAGCTCTTAAAGGCATCCAATATTCTTAATGCTTCTTCATCTTCAAAGATGGAATTGGCAAAAAGGGTAGGGCTTCAATTGGAGGAAGCCACAGTGAATGATCTTTTGATACCCTCACTGTCTTACACAAACGATTCAGTGTATGATGTTGAGTTGGTGAGGACCATATTGGAGCAGTTTGTGTCACAAGGGCAGAGTCCACCAACTAGTCCTGCAAGATCTAGGTTGGCCTTTGAAAGAAGAAGGTCTCGTTCAGCTGAGAATATTAACTTGGAGTTTCAAGAGAGTAGGAGGTCCTCTTCAGCATCTCACAGTTCAAAACTGAAAGTGGCAAAGCTTGTGGATAGGTATCTTCAAGAAGTTGCCAGGGATGTGAATTTTCAGTTGTCGAAATTCATTGCTCTTGCTGAGATTATACCAGATTTTGCAAGACATGATCATGATGATCTCTACAGGGCTGTTGACATTTATCTCAAGGCTCATCCAGAACTCAACAAGAGTGAAAGGAAAAGATTGTGCCGGATTCTTGACTGCAAAAAACTGTCTATGGAAGCATGCATGCATGCAGCACAAAATGAGCTTCTTCCCCTCAGGGTTGTTGTTCAAGTTCTCTTCTTTGAGCAAGCTAGAGCAGCACAGGCTGGTGGCAAAGTGACTGATTTACCAACCAATATCAAGGCATTACTCACAGCACATGGTATTGACCCATCAAAACCAACAGCACCATTAAGCACTACTACAAGTATAAATGCTGAGGAAAATTGGAGTGTTTCAAACTTCAAATCACCAAAGTCAAAGTCTTCAACACTGAGGATGAAGCTAGCTGAAGATGAGGACTTCAATCAAAATGGTTTGGCCCATGACGGAATTGGAAGGAATTCTAGATTTAAGGCCATATGTGCTATTCCAACCCAACCAAAAAAAATGCTTACTAAGTTCTGGTCTACTACCAATAGAACTGCTGCTACAACTGAAAAGAATTGA 1911 0.4249 MKFMKLGSRPDTFYTAEAVRSVSSEVSSDLIIQVKGSRYLLHKFPLLSKCLRLQKLCSEPPDSSSQHQIIQLPDFPGGMEAFELCAKFCYGITITLSPYNIVAARCGAEYLQMTEEVEKGNLIQKLEVFFNSCILRGWKDSIVSLQSTKALPMWSEDLGITSRCIEAVAAKVLSHPSKVSLSHSHSRRVRDDVSCNGNQSVRHNKSGNKGWWAEDLAELSIDLYWRTMIAIKSGGKIPSNLIGDALKIYASRWLPNITKNGGHIKKQAVADSESDNLVGEIASKHRLLLESVVSLLPAEKGAVSCGFLLKLLKASNILNASSSSKMELAKRVGLQLEEATVNDLLIPSLSYTNDSVYDVELVRTILEQFVSQGQSPPTSPARSRLAFERRRSRSAENINLEFQESRRSSSASHSSKLKVAKLVDRYLQEVARDVNFQLSKFIALAEIIPDFARHDHDDLYRAVDIYLKAHPELNKSERKRLCRILDCKKLSMEACMHAAQNELLPLRVVVQVLFFEQARAAQAGGKVTDLPTNIKALLTAHGIDPSKPTAPLSTTTSINAEENWSVSNFKSPKSKSSTLRMKLAEDEDFNQNGLAHDGIGRNSRFKAICAIPTQPKKMLTKFWSTTNRTAATTEKN* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0333 636 Pfam NPH3 family 211 495 IPR027356 -
Gso2g0333 636 PANTHER OS12G0117600 PROTEIN 1 635 IPR043454 -
Gso2g0333 636 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 1 635 - -
Gso2g0333 636 SUPERFAMILY POZ domain 21 117 IPR011333 -
Gso2g0333 636 Gene3D Potassium Channel Kv1.1; Chain A 15 123 IPR011333 -
Gso2g0333 636 ProSiteProfiles NPH3 domain profile. 210 519 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0333 Gso-Chr2 3615334 3618872 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0333 26 543 EF-hand Containing Proteins AT3G44820 34.807 6.80e-92 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0333 - - gmx:100778446 1188.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0333 2 3615334 3618872 Gso2g0333 2 3615334 3618872 ECH