Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0312 ATGGCGATGACGTTTGTTCCTTCAACATCTTCCAGTTTCCGACCGACGTTGATTCGATGCGCCAACTCCAACGAGCGGCGGGCGCTGTTTAGCCGCATTGCTCCTGTCTATGATAACCTGAATGATTTGCTGAGCCTTGGCCAACACCGGATTTGGAAGCGAATGGCAGTGTCCTGGACTGGAGCGAAAATGGGAGACCGTGTGTTGGATGTGTGCTGTGGAAGTGGGGATTTGTCCTTTCTCTTGTCCGATCAAGTTGGCTCTCATGGCAAGGTGATTGGTCTTGATTTCTCGAAGGATCAGCTATTGTTTGCCTCATCTCGGCAGGAATCACTTTCAAAGAATTGCTTCACAAATATCGAGTGGGTTGAAGGTGATGCTCTTGACTTGCCATTTTCTGATGGTTGGTTTGATGCTATCACTATGGGCTATGGTCTTCGAAATGTGGTTGATAAGCAAAAGGCCATGCAAGAAATTTTCCGCGTCCTAAAAACTGGCTCTACAGTGTCTATCCTGGACTTTAATAAAAGCAATGAGTTGCTAACTTCTGCATTTACGGAATGGATGATTGACAATATTGTTGTCCCTGTTGCCACTGGTTATGGTCTTTCAGAGGAATACAGATACCTCAAAAGTTCAATAAGAGAATTTTTAACAGGTAAGGAATTGGAGAAACTTGCCTTGGAAGTAGGATTTTCTGCTGCTCGACATTATGAGATTGGTGGAGGCCTCATGGGGTGTTTGGTAGCTAAGCGTTAG 759 0.4532 MAMTFVPSTSSSFRPTLIRCANSNERRALFSRIAPVYDNLNDLLSLGQHRIWKRMAVSWTGAKMGDRVLDVCCGSGDLSFLLSDQVGSHGKVIGLDFSKDQLLFASSRQESLSKNCFTNIEWVEGDALDLPFSDGWFDAITMGYGLRNVVDKQKAMQEIFRVLKTGSTVSILDFNKSNELLTSAFTEWMIDNIVVPVATGYGLSEEYRYLKSSIREFLTGKELEKLALEVGFSAARHYEIGGGLMGCLVAKR* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0312 252 Hamap Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 17 252 IPR004033 GO:0008168
Gso2g0312 252 Hamap 2-phytyl-1,4-naphtoquinone methyltransferase [menG]. 25 252 IPR032904 GO:0042372|GO:0052624
Gso2g0312 252 ProSitePatterns ubiE/COQ5 methyltransferase family signature 1. 37 52 IPR023576 GO:0008168
Gso2g0312 252 PANTHER METHYLTRANSFERASE 11 252 - -
Gso2g0312 252 CDD AdoMet_MTases 67 166 - -
Gso2g0312 252 Gene3D Vaccinia Virus protein VP39 32 252 IPR029063 -
Gso2g0312 252 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 24 244 IPR029063 -
Gso2g0312 252 PANTHER 2-PHYTYL-1,4-BETA-NAPHTHOQUINONE METHYLTRANSFERASE, CHLOROPLASTIC 11 252 - -
Gso2g0312 252 Pfam ubiE/COQ5 methyltransferase family 25 246 IPR004033 GO:0008168
Gso2g0312 252 ProSiteProfiles UbiE family SAM-binding methyltransferase profile. 21 252 IPR004033 GO:0008168
Gso2g0312 252 TIGRFAM MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 28 251 IPR004033 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0312 Gso-Chr2 3362825 3366021 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0312 63 189 Acyl Lipid Metabolism Gene Families AT3G18000 29.921 9.05e-10 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0312 K23095 - gmx:100789470 505.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0312 2 3362825 3366021 Gso2g0312 2 3362825 3366021 ECH