Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0310 ATGGACTCTTGTTCTAAGAGACTTGCATTCTCGGAACCCTTTATGTCACAGAGGAGAAAGGTGATTTCTGGGTTCAGTTTGGGCGTTGGAGTTTCTCTCCTTTTCCTCACTCTCATCTTGCTCAACAACACTTCCCTCTCCGTTCCCAAGGTTCAAGTGTTTCTCCAAGGATCCGATTCCAATTCCTCTTCTTCTTCATTCTCGTGGCGTTTTCCCTTCACAACCACTCTTTCTTCCAACGCTTCCGTGAGTCCTCTGCATAGGGTTGAAGTGAACGTGTCGTCAAGTGAGGGTTCGGAGAAAAGTTCGGAGGAAACCCTTTTGGGGAATCTCACTGGGGATCAGAAAAATGCAAGCTTGCATGATGGGCACGAGGAAGATGATGAACATTGTTGTTCTTTGAAGAATGTTACTTTGGCGGTGAAGGAAAATGCGCTAGTGGGAAATTCGTCATGCAATGGTGGTGGTAGTGGTGTGGGAAAGTGTGAAGATGGGTTGTTGATGAAGGAAAGTAATAATAATGATAGTATTAGTGTTAGTGTTAGTGGTTTGCTTGGGGAATGTGACATCTTTGATGGGAAATGGGTGAGGGATGAATCGAAGCCTTACTATCCATTGGGGTCTTGTCCTCATGTCGATAGGGATTTTGATTGCCATCTTAATGGAAGGCCTGATAGTGAGTATGTGAAGTGGAAATGGCAGCCGAATGGGTGTGACATTCCAAGTTTGAATGCAACTGATTTTCTGGAAAAGTTGCGAGGACAGAAGCTGGTTTTTGTGGGGGATTCACTGAACAGGAACATGTGGGAGTCCATGGTGTGTATCCTACGTCAAAGTGTCAAGGACAAGAAACATGTTTTTGAAATTTCAGGAAAAACAGAATTTAAGAAGAAAGGTGTCTATGCTTTTAGATTTGAGGATTATAATTGTTCAGTAGATTTTGTCAGTTCACCATTCATTGTTCAAGAGTCAAATTTCAAAGGCATAAATGGGTCCTTTGAGACATTAAGATTGGATTTAATGGACCAGACAAGTACTACCTATCGTGATGCTGATATCATAGTCTTCAATACAGGCCATTGGTGGACCCACGAGAAAACATCGAGGGGAGAAGACTATTATCAAGTAGGCAACCATGTATACCCCAGACTCAAAGTTCTGGATGCATATACTAGGGCATTGACCACTTGGGCTACATGGGTTGACAATAATATTGACGCCAATCGAACTCAGGTTTTCTTCAGAGGATATTCAGTAACCCATTTCAGGGGTGGGCAATGGAATTCAGGTGGAAAGTGCCACAAAGAAACCGAGCCAATATCTAATGGAAAGCACTTACGCAAGTATCCCTCAAAAATGAGGGCTTTTGAGCATGTGGTCATCCCAAAGATGAAAACCCCAGTGATATATATGAACATTAGTAGGCTTACAGATTACAGAAAAGATGGACATCCTTCTATATACAGAATGGAGTATAAGACAGCAGAAGAACAGACCGCTGCTGAACAACATCAAGATTGCAGTCATTGGTGTTTGCCTGGAGTACCTGATACTTGGAATGAATTACTGTATGTTTCTCTCTTGAAATATGGTAAAGGCCATTGGAAAAGCTGA 1614 0.4244 MDSCSKRLAFSEPFMSQRRKVISGFSLGVGVSLLFLTLILLNNTSLSVPKVQVFLQGSDSNSSSSSFSWRFPFTTTLSSNASVSPLHRVEVNVSSSEGSEKSSEETLLGNLTGDQKNASLHDGHEEDDEHCCSLKNVTLAVKENALVGNSSCNGGGSGVGKCEDGLLMKESNNNDSISVSVSGLLGECDIFDGKWVRDESKPYYPLGSCPHVDRDFDCHLNGRPDSEYVKWKWQPNGCDIPSLNATDFLEKLRGQKLVFVGDSLNRNMWESMVCILRQSVKDKKHVFEISGKTEFKKKGVYAFRFEDYNCSVDFVSSPFIVQESNFKGINGSFETLRLDLMDQTSTTYRDADIIVFNTGHWWTHEKTSRGEDYYQVGNHVYPRLKVLDAYTRALTTWATWVDNNIDANRTQVFFRGYSVTHFRGGQWNSGGKCHKETEPISNGKHLRKYPSKMRAFEHVVIPKMKTPVIYMNISRLTDYRKDGHPSIYRMEYKTAEEQTAAEQHQDCSHWCLPGVPDTWNELLYVSLLKYGKGHWKS* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0310 537 Pfam PMR5 N terminal Domain 187 239 IPR025846 -
Gso2g0310 537 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 12 535 IPR029962 GO:0016413
Gso2g0310 537 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 240 524 IPR026057 GO:0016740
Gso2g0310 537 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 12 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0310 Gso-Chr2 3322505 3326855 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0310 - - gmx:100801114 1060.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0310 2 3322505 3326855 Gso2g0310 2 3322505 3326855 ECH