Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0302 ATGTTGGGAGGCAACAACGGAAATTGCTTGCTTCCTGTTTTCTTGGACGAAACTCAATTTCAGCATCAAACTAATGTGTCAAATCAATTGCAGTTGTTTGGAAATTTACAAGCTGGATGTAGTGTTGACCCAGTTAATTACTTTGGAAATGAGCATATCAGCTCCATGATTCAGCCTAATAAACGAAGCAAGGAAATGGAAGATATATCAAAACAAAGGCTTCAGATTTCCTTAAACTACAATGTTCATCAAGATGATGCTGAACGATTAGCAAGTATTCCAAATCCTAACCCCGTGTCAACAGGATTGAGGCTTTCATATGATGATGATGAGCGTAACTCATCTGTTACTTCTGCAAGTGGAAGCATGGCTGCCACACCGTCTATCATATTGTCTCTTGGTGACAATATCAGAACTGAGCTTGATAGGCAGCAAGAAGAGTTGGACCAGTATGTTAAACTTCAGAAGGAACAACTGTCAAAGGGAGTGAGAGACATGAAGCAAAAGCACATGGCTGCTCTCCTTACCTCCATTGAGAAAGGTATTAGCACGAAGCTAAAGGAAAAAGACGTGGAGATAGAAAACATGAACCGAAAAAATAGGGAGCTGGCTGAAAGAATAAAGCAGGTGGCTGTTGAAGTGCAAAGCTGGCATTACAGAGCAAAGTATAATGAGTCAATTGTCAATACTTTAAGGAACAACCTTCAGCAGGCAATCTCACAAGGAGCTGAACAGGGGAAGGAAGGGTTTGGAGACAGTGAAGTTGATGATGATGCCTCATATATAGATCCTAATAACTTCCTGAACATTCTGGCTGCGCCTATAAACTCTACTCACAAGAGCTACCAAGATATGGAGAATCTGACTTGTAGAGCATGCAAGGTGAAGACAGTTTCGATGTTGTTGATGCCTTGTAGGCACCTGTGCTTGTGTAAGGATTGTGAGGGATTTATCAATGTTTGTCCTATATGCCAATTGATAAAAACTGCAAGTGTTGAGGTGCATCTGTCTTAA 1014 0.4093 MLGGNNGNCLLPVFLDETQFQHQTNVSNQLQLFGNLQAGCSVDPVNYFGNEHISSMIQPNKRSKEMEDISKQRLQISLNYNVHQDDAERLASIPNPNPVSTGLRLSYDDDERNSSVTSASGSMAATPSIILSLGDNIRTELDRQQEELDQYVKLQKEQLSKGVRDMKQKHMAALLTSIEKGISTKLKEKDVEIENMNRKNRELAERIKQVAVEVQSWHYRAKYNESIVNTLRNNLQQAISQGAEQGKEGFGDSEVDDDASYIDPNNFLNILAAPINSTHKSYQDMENLTCRACKVKTVSMLLMPCRHLCLCKDCEGFINVCPICQLIKTASVEVHLS* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0302 337 ProSiteProfiles Zinc finger RING-type profile. 290 325 IPR001841 -
Gso2g0302 337 PANTHER S-RIBONUCLEASE BINDING PROTEIN SBP1-RELATED 4 336 - -
Gso2g0302 337 PIRSF SBP1_RNase_bind 1 337 IPR017066 -
Gso2g0302 337 MobiDBLite consensus disorder prediction 90 121 - -
Gso2g0302 337 Coils Coil 186 213 - -
Gso2g0302 337 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 272 336 IPR013083 -
Gso2g0302 337 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 4 336 IPR017066 -
Gso2g0302 337 Pfam Zinc finger, C3HC4 type (RING finger) 287 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0302 Gso-Chr2 3224187 3229131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0302 284 325 Miscellaneous Gene Families AT4G39050 40.476 5.93e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0302 K19042 - gmx:100790534 676.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0302 2 3224187 3229131 Gso2g0302 2 3224187 3229131 ECH
Gso1g0264 1 3137979 3142656 Gso2g0302 2 3224187 3229131 GST