LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso2g0277	ATGAACCCGTTTTCTTCAGGAACGCGTTTGAGGGACATGATTCGGGCCATACGTGCTTGTAAGACTGCAGCAGAAGAACGAGCTGTTGTAAGAAAAGAATGTGCTGCCATTCGCGCTGCAATAAATGAAAATGATAATGACTATAGACATCGGAATCTGGCTAAGCTAATGTTCATCCACATGCTTGGTTACCCCACACATTTTGGTCAAATGGAATGCCTCAAGTTGATAGCATCTCCTGAATTTCCAGAGAAGAGAATAGGTTATCTTGGCCTCATGTTGCTTCTTGATGAAAGACAAGAAGTTCTAATGTTGGTCACCAATTCTTTGAAACAAGATCTTAATCACACAAATCAGTATATAGTGGGACTTGCTCTTTGTGCTTTAGGAAACATTTGTTCAGCAGAAATGGCCCGTGATCTTGCACCAGAGGTTGAGAGATTGCTGCAATTTCGAGATCCAAATATTCGCAAGAAGGCAGCATTATGCTCTATAAGGATCATAAAGAAAGTTCCAGACTTGGCAGAAAATTTTATCAATCCTGCTACTTCCTTACTCAGAGAGAAGCATCATGGGGTTTTGATCACTGGGGTTCAGCTTTGTACAGATCTGTGTAAAATTAGCACTGAAGCTCTTGAACATATTAGGAAGAAATGCACAGATGGTTTGGTCAGAACTCTTAAGGATCTAGCCAATAGTCCATATTCACCAGAGTATGATATTGCTGGTATCACAGACCCATTTCTGCACATCAGATTGCTAAAACTTTTGCGAGTGTTGGGTGAAGGCAATGCTGATGCTAGCGACACCATGAATGACATACTTGCCCAGGTGGCTACGAAGACTGAGTCAAATAAAGTTGCAGGGAATGCCATTTTATATGAATGTGTTCAAACAATAATGAGCATTGAAGATAATGGTGGCTTACGTGTACTTGCCATTAATATCCTGGGAAGATTCTTGTCAAACCGTGACAACAATATCAGATATGTGGCATTAAACATGCTAATGAAGGCTGTAACTGCTGATGCTCAGGCAGTACAGAGGCACCGTGCAACCATTATAGAATGTGTGAAGGATTCAGATGCTTCGATTCGGAAAAGAGCCCTTGAACTTGTTTATGTTTTGGTGAATGAGACTAATGTGAAGCCCTTGGCAAAAGAGCTTATAGATTATCTGGAAGTCAGTGATCTTGATTTCAGAGAGGACCTTACTGCCAAAATTTGCTCCATTGTAGCAAAGTATTCCCCAGAGAAGATCTGGTATATTGATCAGATGCTCAAGGTTCTGTCTGAGGCTGGAAACTTTGTAAAAGATGAAGTATGGTATGCCTTAGTTGTTGTGATAAGCAATGCTTCTGAGCTTCATGGATATACAGTAAGAGCATTATACAGAGCATTTCAAACGTCAGCTGAACAGGAGACTCTAGTTCGAGTTACAGTGTGGTGCATTGGGGAGTATGGTGACATGTTAGTCAATAATGTTGGAATGCTAGACATAGAAGATCCAATAACAGTGACTGAGTCCGATGCAGTTGATGTCATAGAGATTGCTATAAAACGCCATGCATCAGATCTTACCACAAAAGCGATGGCTTTGGTTGCACTATTAAAGCTCTCTTCACGTTTCCCTTCATGTTCAGAGAGGATCAAAGAAATTATTGTTCAGTTCAAAGGGAGCTTTGTGCTAGAATTGCAGCAGAGGGCTATTGAATTCAGTTCGATTATTTCAAAGCATCAAAATATTAGGTCTACACTTGTAGAAAGGATGCCAGTTTTGGATGAGGCAACTTACATTGGTAGGAGGGCTGGGTCTCTGCCAGGCGCAGCTTCAACTCCAACTGCACCTTCATTTAATCTTCCAAATGGAGTAGCCAAACCTGTGGCTCCTCTTGTAGATCTACTTGATCTAAGTTCAGATGATGCTCCTGCTCCGAGCTCTTCTGGTGGAGGAGATATTCTTCAGGACCTTCTTGGTGTTGATCTGTCACCAGCATCACAACAATCTGTTGCTGGCCAAGCTTCAAAAAGTGGCAACGATGTTCTTTTGGATCTTCTGTCTATCGGATCACCTTCTGCTGAAAGCAGCTCATCTACAGTAGACATCTTATCCTCCAATTCGAGTAACAAAGCACCAGTTTCTTCATCATTGGATGGTCTCTCATCTCTTTCACTTTCGACAAAAACAACTTCAAATGCTGCTCCTATGATGAATTTATTGGATGGTTTTGCCCCCAGCCCGCCAACAGAAAACAATGGATCGGTTTATCCATCAGTAACTGCATTTGAGAGCAGCTCCTTGAGGTTGACATTCAATTTCTCAAAACAACCAGGAAACCCACAAACAACAGTTATCCAGGCTACTTTTATGAATTTGTCCTCCAATTCATATACAGATTTTGTTTTTCAAGCAGCAGTTCCTAAGTTTCTTCAATTGCACTTAGATCCAGCTAGCAGCAATACTCTTCCCGCAAATGGGTCCATAACCCAAAGTTTGAAAATTACTAATAGCCAACATGGGAAGAAATCTCTTGTCATGCGTATAAGGATAGCATACAAGATAAATGGCAAGGATACACTGGAGGAAGGACAAGTCAATAACTTTCCTCATGGTTTATGA	2619	0.4124	MNPFSSGTRLRDMIRAIRACKTAAEERAVVRKECAAIRAAINENDNDYRHRNLAKLMFIHMLGYPTHFGQMECLKLIASPEFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHTNQYIVGLALCALGNICSAEMARDLAPEVERLLQFRDPNIRKKAALCSIRIIKKVPDLAENFINPATSLLREKHHGVLITGVQLCTDLCKISTEALEHIRKKCTDGLVRTLKDLANSPYSPEYDIAGITDPFLHIRLLKLLRVLGEGNADASDTMNDILAQVATKTESNKVAGNAILYECVQTIMSIEDNGGLRVLAINILGRFLSNRDNNIRYVALNMLMKAVTADAQAVQRHRATIIECVKDSDASIRKRALELVYVLVNETNVKPLAKELIDYLEVSDLDFREDLTAKICSIVAKYSPEKIWYIDQMLKVLSEAGNFVKDEVWYALVVVISNASELHGYTVRALYRAFQTSAEQETLVRVTVWCIGEYGDMLVNNVGMLDIEDPITVTESDAVDVIEIAIKRHASDLTTKAMALVALLKLSSRFPSCSERIKEIIVQFKGSFVLELQQRAIEFSSIISKHQNIRSTLVERMPVLDEATYIGRRAGSLPGAASTPTAPSFNLPNGVAKPVAPLVDLLDLSSDDAPAPSSSGGGDILQDLLGVDLSPASQQSVAGQASKSGNDVLLDLLSIGSPSAESSSSTVDILSSNSSNKAPVSSSLDGLSSLSLSTKTTSNAAPMMNLLDGFAPSPPTENNGSVYPSVTAFESSSLRLTFNFSKQPGNPQTTVIQATFMNLSSNSYTDFVFQAAVPKFLQLHLDPASSNTLPANGSITQSLKITNSQHGKKSLVMRIRIAYKINGKDTLEEGQVNNFPHGL*	873

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso2g0277	872	Gene3D	-	2	594	IPR011989	-
	Gso2g0277	872	SUPERFAMILY	ARM repeat	25	592	IPR016024	-
	Gso2g0277	872	PIRSF	AP1_gamma	6	872	IPR017107	GO:0005794\|GO:0016192\|GO:0030121
	Gso2g0277	872	Gene3D	-	735	871	-	-
	Gso2g0277	872	SUPERFAMILY	Clathrin adaptor appendage domain	732	871	IPR013041	-
	Gso2g0277	872	SMART	alpha_adaptinc2	751	869	IPR008152	GO:0006886\|GO:0016192
	Gso2g0277	872	MobiDBLite	consensus disorder prediction	691	721	-	-
	Gso2g0277	872	Pfam	Adaptin C-terminal domain	757	869	IPR008152	GO:0006886\|GO:0016192
	Gso2g0277	872	PANTHER	AP-1 COMPLEX SUBUNIT GAMMA	5	871	-	-
	Gso2g0277	872	PANTHER	ADAPTIN, ALPHA/GAMMA/EPSILON	5	871	-	-
	Gso2g0277	872	Pfam	Adaptin N terminal region	27	579	IPR002553	GO:0006886\|GO:0016192\|GO:0030117
	Gso2g0277	872	ProSiteProfiles	Gamma-adaptin ear (GAE) domain profile.	754	869	IPR008153	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso2g0277	Gso-Chr2	2995489	3008013	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso2g0277	K12391		-	gmx:100815152	1606.27

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso2g0277	2	2995489	3008013	Gso2g0277	2	2995489	3008013	ECH
	Gso1g0285	1	3390553	3403617	Gso2g0277	2	2995489	3008013	GST