Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0224 ATGTCTTCCCGGCGCCACTCACTAAGCGGGCCGCCACCACTCTCCGGCACCGAGTCGACTCAGAACCTCCGACAGCGAGTCATCACGTGCCTCAACAAACTCTCCGACCGCGACACTCTCGCCGGCGCCGCCGCGGAACTCGAGTCCATCGCCAGAACCCTAAACCACGACTCGTTCTCGTCCTTCCTCTCTTGCATTCACAACACTGATTCCTCTTCCAAAGCACCAGTTCGAAAACAATGCGTTCATCTCTTAAACGTTCTCTCGCGCTTCCACGGCGAAGCGCTTTGGCCTTTCATATCGAAAATGCTCGCCACCGTGCTCCGGCGGCTCCGCGACTCCGACTCCGCCGTGCGATCCGCGTGCGTGGACGCCGTCGCGTCGATGTCGTCGCGGATCACGGGACCGTCGTTCTCCGCCGCGTTCCTGCGGCCGCTCATGGACGCGCTGGCGCAGGAGCAGGAGGCCAACGCGCAGATCGGCGCCGCGCTGTGCCTCGCGGCGGCGGTCGAGGCGGCGCCGGACCCCGATGCGGAGGCGCTCCGGCGTAGCGCGCTGCCGCGGCTCGGGAAGCTCGTGAAGAGCGAGGCGTGCAGGGCGCGGGCGGCGCTGCTGGTTCTGATCGGAAGCGTGGTCGGCGCTGGCGGCGCTTCGAGCCGCGGTGCGGTGAACTGGCTCGTGCCGTGCCTAGTCGAGTTCCTCGGCAGCAAGGACTGGACGGTGAGGAAGGCCGCGGCGGAGGCGCTGGCGAAGGTGGCTTCGGTGGAGAGAGATCTGGCGTCGCAGCATAAGGTTCTGTGTTTGAATTCGTTGCAGAATCGGAGGTTTGATAAGATCAAAGTGGTTCGGGAGACTATGAATCGTGCATTGGAGACGTGGAAGGAGGTAACCGAGGATGCTCCTGCTTACGTTAAATCTGAATGTGCTTCTGTTGGCACAGATGATGGTAAAAGTCAGTGTGTCTCTAAAAGTTCACCCGATGTTGGCTCTAAGTTGTCTTCTAAAACAGCCCCTGCCAACAGGTCCCCTCCATCAGTGATTTCATTCATGTCGTCCATGAAAAGAGAGAGTTCTCTAAAGAGTAATGAGAAGCATTTGAGAATGGGGACATTGAATCATCAGGGTCATGAGAAATCCTCCAATGAGAAACGTGAAACTCCATTTTCGAGGTCCTCCCACTCAAATTTGTCTAGGGAAGATGATATTAAAAGGTGTGATGTTGAAGTTTCTAAGCCACCCCCATATCAAAACGGGGTAAATTCGAGGGCAGAGATAAAGCGTGTTCTCTTTAGCAAGGTGTCTGATGAAAAAATGAGGAGATTCAGTAGTTCAAAATCTTGTGTGGTTCCATGTATTGATGATGATGATCTTGATGCAAATGAAGTTTGTGAGAGCCCACAAGATGTTGAAGACTTTGCTTTGATCCGTGAACAACTTCTTCAAATTGAAAACCAGCAATCAAATCTGTTAGACCTACTCCAGAGATTTATTGGAAGCTCCCAAAGTGGTATGAATTCTCTGGAGTCACGTGTACATGGCCTAGAGATTGCCCTGGATGAAATATCTCAGGATTTGGCTGTTCCAGGTGCTAGGGTTTCCAATATTGATGCCACAGAAGACACTTGTTGCAAGCTACCTGGTACTGACTTTTTGAGTTCTAAATTCTGGAAGAAGACAGAAGGTCGTTATTCCACATCAAGGTTCTCTTTAGGAAGCATACCATCAACAAATGCTGTGCATAATGCAACCAATAAAGATGGAAGCAGAGAAATATTAACTGCAAATAACAGCCGATTGCAACATGGTAAGGGTGGATATTTTGTGAATCCATCGGCAGAAGTTCAAAGCGATTTGAAAGGGCATCATACGTATAAAGTGTCTAAAAACATGGTCCAAGACGCCATGAGGAGATATGATGGCATTCAACCTGCTACTGAATCACTGAGGAACCAGAATATCAGGTCATCCGTGTAG 1974 0.5182 MSSRRHSLSGPPPLSGTESTQNLRQRVITCLNKLSDRDTLAGAAAELESIARTLNHDSFSSFLSCIHNTDSSSKAPVRKQCVHLLNVLSRFHGEALWPFISKMLATVLRRLRDSDSAVRSACVDAVASMSSRITGPSFSAAFLRPLMDALAQEQEANAQIGAALCLAAAVEAAPDPDAEALRRSALPRLGKLVKSEACRARAALLVLIGSVVGAGGASSRGAVNWLVPCLVEFLGSKDWTVRKAAAEALAKVASVERDLASQHKVLCLNSLQNRRFDKIKVVRETMNRALETWKEVTEDAPAYVKSECASVGTDDGKSQCVSKSSPDVGSKLSSKTAPANRSPPSVISFMSSMKRESSLKSNEKHLRMGTLNHQGHEKSSNEKRETPFSRSSHSNLSREDDIKRCDVEVSKPPPYQNGVNSRAEIKRVLFSKVSDEKMRRFSSSKSCVVPCIDDDDLDANEVCESPQDVEDFALIREQLLQIENQQSNLLDLLQRFIGSSQSGMNSLESRVHGLEIALDEISQDLAVPGARVSNIDATEDTCCKLPGTDFLSSKFWKKTEGRYSTSRFSLGSIPSTNAVHNATNKDGSREILTANNSRLQHGKGGYFVNPSAEVQSDLKGHHTYKVSKNMVQDAMRRYDGIQPATESLRNQNIRSSV* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0224 657 Pfam HEAT repeat 226 254 IPR000357 GO:0005515
Gso2g0224 657 Gene3D - 14 372 IPR011989 -
Gso2g0224 657 PANTHER TORTIFOLIA1-LIKE PROTEIN 4 3 641 - -
Gso2g0224 657 SUPERFAMILY ARM repeat 20 296 IPR016024 -
Gso2g0224 657 Coils Coil 504 524 - -
Gso2g0224 657 MobiDBLite consensus disorder prediction 1 21 - -
Gso2g0224 657 MobiDBLite consensus disorder prediction 310 403 - -
Gso2g0224 657 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 3 641 IPR033337 GO:0005874|GO:0008017
Gso2g0224 657 MobiDBLite consensus disorder prediction 312 356 - -
Gso2g0224 657 MobiDBLite consensus disorder prediction 357 403 - -
Gso2g0224 657 ProSiteProfiles HEAT repeat profile. 226 264 IPR021133 -
Gso2g0224 657 Coils Coil 475 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0224 Gso-Chr2 2354964 2360326 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0224 - - gmx:100781440 1112.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0224 2 2354964 2360326 Gso2g0224 2 2354964 2360326 ECH
Gso1g0330 1 4099415 4103885 Gso2g0224 2 2354964 2360326 GST