Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0173 ATGATTTCAAATCAAAATCTGTTGTTCAATCTACATTTATTTATCTTTCCATATATAGTGTCATGGTTCCAAATCAAATTCTGTTATTCATGCACTAGAAGCATTTCAAGCATTCCAGATATGGCGCAAGAACAAGAGTACAGAACCAGCACCACACTTCCAAAGTGTGATACCTATTTCGAAACCATACAATCCAGAAAGAAGCTACCACTGTCTCTGCAGGAGACCTTGACAGATGCATTTGCAAAGATTCCTGTTTCTTCTTTTCCAGCAGTTCCTAGTGGAAAAGTGATTGAAATTCTAGCAGACACGCCCATTGGTGAAGCAGTTAAGATTCTATCTGAAAGCAACATTTTATCAGCTCCAGTTAAAGACCCAGAAGCAGCTAATAGTTCAGATTGGAGAAGAAGGTACCTTGGCATCATAGATTATTCAGCAATCATTCTCTGGGTGCTGGAGGGTGCAGAACTTGCACACAAAGCACTATTGGTAGGTACAGCAACAGCTGCTGGAGTTGGTGCAGGAGCCGCTGGTGCTATGGGAGCGCTAGCATTGGGAGTGACAGGTCCTGCAGCAATTGCTGGGCTAACCGCTGCTGCAGCAGGTGCTGCACTGGCAGGTGGCATTGCTGCAGATAGAGTGGTGGCTAAAGATGCACCTCAAGCAGCTGATAACCTAGGAGAGGACTTTTACAAAATAATACTGGAAGAAGAACCCTTCAAGTCAACAACGGTGCGATCAATAATTAAATCATACCGATGGGCTCCTTTTGTTCCAGTTGCAAGAAATAGTGCTATGTTGACTGTCCTGCTGCTTCTCTCAAAGTACAGGCTGAGGAATGTACCTGTGATAGAAACAGGTAAGCCTGACATTGTAAACTTCATTACTCAATCAGCAGTTGTCCAAGGTCTCGAGGGATGCAAAGGAAGAGATTGGTTTGACTGCATTGCGGAAAAGCGTATAGCTGATCTGGGACTTCCATTTATGTCTACTGATGAGGTTATTAGCATCCAGAGCAATGAATTGATTCTTGAAGCTTTCAAGCAGATGAGGGATAATAAAATTGGTGGTCTTCCTATAGTAGAGGGGCCAAAGAAGAGAATTGTTGGAAACTTGAGCATACGAGACATCAGACACTTACTTCTAAGGCCTGAGCTTTTCACCAATTTTAGGAAGTTGACTGTGATGAATTTCATGAACAAAATTGTCTCGTCATCCCTTCAAACTGGAAAAGTTACCCAATCCATAACATGCAAGCCTGACTCAACACTGCAGGGTGTGATCCATACTCTTGCTTCTCAGTCTATTCACAGGATTTATGTAGTAGATGGGCAGGATGAAGTAGTTGGAGTCATTACACTGAGAGATGTGATCTCTTGTTTTGTCACCGAACCTCCTTACAATTTTGACGATTACTATGGATTTGCGGTGAAAGAGATGTTGAATCAGTGA 1452 0.4263 MISNQNLLFNLHLFIFPYIVSWFQIKFCYSCTRSISSIPDMAQEQEYRTSTTLPKCDTYFETIQSRKKLPLSLQETLTDAFAKIPVSSFPAVPSGKVIEILADTPIGEAVKILSESNILSAPVKDPEAANSSDWRRRYLGIIDYSAIILWVLEGAELAHKALLVGTATAAGVGAGAAGAMGALALGVTGPAAIAGLTAAAAGAALAGGIAADRVVAKDAPQAADNLGEDFYKIILEEEPFKSTTVRSIIKSYRWAPFVPVARNSAMLTVLLLLSKYRLRNVPVIETGKPDIVNFITQSAVVQGLEGCKGRDWFDCIAEKRIADLGLPFMSTDEVISIQSNELILEAFKQMRDNKIGGLPIVEGPKKRIVGNLSIRDIRHLLLRPELFTNFRKLTVMNFMNKIVSSSLQTGKVTQSITCKPDSTLQGVIHTLASQSIHRIYVVDGQDEVVGVITLRDVISCFVTEPPYNFDDYYGFAVKEMLNQ* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0173 483 ProSiteProfiles CBS domain profile. 411 471 IPR000644 -
Gso2g0173 483 Pfam CBS domain 414 459 IPR000644 -
Gso2g0173 483 Pfam CBS domain 329 382 IPR000644 -
Gso2g0173 483 ProSiteProfiles CBS domain profile. 91 157 IPR000644 -
Gso2g0173 483 Gene3D - 90 307 IPR046342 -
Gso2g0173 483 SMART cbs_1 256 305 IPR000644 -
Gso2g0173 483 SMART cbs_1 96 152 IPR000644 -
Gso2g0173 483 SMART cbs_1 333 382 IPR000644 -
Gso2g0173 483 SMART cbs_1 414 462 IPR000644 -
Gso2g0173 483 CDD CBS_pair_SF 96 162 - -
Gso2g0173 483 PANTHER BNAANNG38820D PROTEIN 50 482 - -
Gso2g0173 483 SUPERFAMILY CBS-domain pair 76 302 IPR046342 -
Gso2g0173 483 ProSiteProfiles CBS domain profile. 329 387 IPR000644 -
Gso2g0173 483 SUPERFAMILY CBS-domain pair 315 467 IPR046342 -
Gso2g0173 483 Gene3D - 314 464 IPR046342 -
Gso2g0173 483 CDD CBS_pair_SF 331 458 - -
Gso2g0173 483 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 50 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0173 Gso-Chr2 1812964 1816488 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0173 - - gsj:114379046 881.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0173 2 1812964 1816488 Gso2g0173 2 1812964 1816488 ECH