Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0162 ATGAAACTATATAATAAAACCCAAGATAGTTTTAATTTAATTCTGCTTCAGAAATCCCTGCGTGAAGAAGAAATCACTGTGTGTGATTCAATTGCATCGGTTTCTTCAATTCCAGCACCGCATCATAAGCAGTTGTTGTTTCGGAAACACAAGATGAATTCTGGTGGGTACGCTGTTGAGGTTACGGGTCTCTCGCCAAAAGCCACGGACAAGGATGTTCGTGACTTCTTTGCTTTCTCCGGTGTCATTGAGAATGTTGAAATTATCAGGTCTGGTGATTATGCTTGTACCGCTTATGTGACATTCAAAGATGCATATGCTCAAGAAACTGCATGCTTGCTCAGTGGAGCCACTATTTTAGATCAACGTGTATGCATAACACGCTGGGGACACTATGAAGATGAATTTGATTTTTGGAACCAGCCTTCGTATAGTCATGAGGATGAGACTGCTTCAACTACACCACAAAGCAATCAATTTGTTTCCTCTGCTGGAGAAGCAGTTACCATGGCTCAAGAAGTTGTTAGGACCATGCTGTCAAAGGGATATGTTCTCAGCAAGGATGCACTAGCTAAGGCTAAAGACTTTGACGAGTCTCATCAGGTTTCCGCCACTGCAACAGCGAAGGTTTCTGAACTGAGCCAGAGAATTGGCCTATCAGATAAGATATCTGCAGGTATTGGAGCTGTTAAATCTGTGGATCAGAGATATAATGTCTCTGAAACAACCATGGCGGCTGCATCCACAGCAGGAAGATCGGTAGCAGCGGCTGCAAACTCTTTGGTAAATAGCAGCTATTTTTCAAAAGGAGCCTTGTGGGTGTCAGGTGCTCTAACCCGAGCAGCTCAGGTTGCTTCTGATATGGGTACTCACAGGGATAGGCAGTAA 888 0.4381 MKLYNKTQDSFNLILLQKSLREEEITVCDSIASVSSIPAPHHKQLLFRKHKMNSGGYAVEVTGLSPKATDKDVRDFFAFSGVIENVEIIRSGDYACTAYVTFKDAYAQETACLLSGATILDQRVCITRWGHYEDEFDFWNQPSYSHEDETASTTPQSNQFVSSAGEAVTMAQEVVRTMLSKGYVLSKDALAKAKDFDESHQVSATATAKVSELSQRIGLSDKISAGIGAVKSVDQRYNVSETTMAAASTAGRSVAAAANSLVNSSYFSKGALWVSGALTRAAQVASDMGTHRDRQ* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0162 295 SMART rrm1_1 58 128 IPR000504 GO:0003723
Gso2g0162 295 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN 52 295 - -
Gso2g0162 295 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 57 123 IPR000504 GO:0003723
Gso2g0162 295 CDD RRM_Vip1_like 59 127 IPR034360 -
Gso2g0162 295 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 52 295 - -
Gso2g0162 295 Gene3D - 35 133 IPR012677 -
Gso2g0162 295 SUPERFAMILY RNA-binding domain, RBD 47 129 IPR035979 GO:0003676
Gso2g0162 295 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 61 121 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0162 Gso-Chr2 1640755 1643472 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0162 - - gsj:114378905 561.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0162 2 1640755 1643472 Gso2g0162 2 1640755 1643472 ECH