Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1421 ATGGCTCAGCAGAGGCAATCGGGAATGGAGAGGTTTGGGGTGAGAGATCTGCACCACGCCAACGGCGCCGGCGATCACGTCGCCGTCGGGATTCGCGGTGGCGCCGCCCTCAAGCAGCCGCGGCTCCGGCGATCGGCGCGATCGGACAGGGCCACTCACCTGTCGGTGGCCGCAATCCTCGTTTTCCTCTTCCTCGTACTTGTCGTCACTGTGCTCGTATTCTCTTACATTTCTAGAGACGAAATAAGTAACAATGGTGGCGATAGTGATGATTTAAAGAGTGATTCTGATTTTCTTACAAATGTACCACGGATCCAGAGGAAGAAAGTCCTTGACTTTGGGCATGGCTCTGGGGGACATGGCCGGGATTCGAGATATTGGGATAGGGATGATAGGAGAAGGGATGGTGATTACGGCGAGGATATGATGGAGCAGACGAGTAAGGATCATGGAGATGAAAATGCTGAAGATGATGCTTCTGTAAAGACGGATCATGATTCAAAGTCTTCTCAGGATGGTTTACAGCGGAGAGGTGATGGCTTGTATAATGAAGCTGGACGTCATGAGTTGAAAAGGTATGAGGCAGAATATGAGGCTTCTTTGAAGAATCTGGGACACTCCACTGAAGATGATGGGAAAGTGTCGCATGACACTGATCTGGAAAAGAAGAATGCAGCGGATGACATTGATGATGAATATGATGACTTTTTTGATTTTCACGATGCTCAAATGGAAGATTCTGGTGATAGCAAAAATATGAAAGTAAAACATTCTAATTCTAGTGTGCTAAGCTTGGACAATGAGGTTCAGAAACAGAAAGAACCTAATGATTCTTTTGATGAGGAAAACAACGATGATGTTACTTCTGAAGATGTTGAAGGGACATCTTCCTTTAATAAAAAAAAATCTCATGATGGAAAAACAAATGCTAAACATGCAAATCCTTCTAATGGACAATCAACTAGAAAATCACATCCTGAAACAAAGAAGAAAGCCAAACGACGCAAATTTTCAGGATCCTGTGAGATGAAATTGTTAAACTCGACTTCGCAGCTTGTAGAACCACTAGAAAGTCGAAAATTTTCAAGATTTAACTTACAGTACACAGAGACAGAAGAGAAGCCCCTGGGAGATGAACAATGGGTGCCCAGATTTGCAGGTCATCAGAGCTTAGAAGAGAGAGAAAGTTCATTTTTGGCACGTGATCAGCAAATAAACTGTGGTTTTGTTAAAGGTCCTGAAGGGTCTCAAAGCACTGGATTTGACTTGACAGAAGATGATGCAAATTACATCAGCAGGTGCCACATTGCTGTGATTTCATGCATATTTGGAAATTCTGATCGCTTGAGGACCCCAGCCACCAAAACAGTCACTCGATTGTCAAGGAAGAATGTCTGCTTTGTGATGTTTACTGATGAAATTACAATACGGACACTTTCTTCAGAAGGTCATGTGCCTGATAGAATGGGTTTCATTGGCTTTTGGAAATTAGTGGTAGTGAAGAATCTACCCTATGATGATATGCGGAGAGTGGGCAAAATTCCTAAGTTATTGCCGCATCGACTTTTTCCTTTTGCAAGGTATTCAATTTGGTTGGATAGCAAATTACGGCTGCAGCTTGATCCTTTACTTATCTTGGAATATTTTTTGTGGCGAAAGGGTTATGAATTTGCAATATCCAATCACTATGATCGGCATTGCGTGTGGGAAGAAGTTGCACGGAACAAGAAATTGAACAAGTATAATCATACAGTCATAGATGAACAATTTGCATTTTACCGGGCTGATGGACTGGAAAAATTTGATGCATCAGATCCAAATAAGCTTCTTCCAAGCAATGTACCTGAAGGTTCTTTTATTATCAGAGCACACACTCCGATGTCAAATTTGTTTTCCTGTCTGTGGTTCAATGAAGTTGACTGGTTTACCCCTCGTGATCAGCTGAGTTTTGCATATACTTATCAGAAGCTGAGAAGGATGAATCCGGACAAACCTTTTCATCTGAATATGTTCAAGGACTGTGAAAGGAGACACATAGCCAAGCTGTTCCGTCATAGGTTGGACGAGAAGAGGATAAATCGTCAAAAAACAACAGAATAA 2100 0.4248 MAQQRQSGMERFGVRDLHHANGAGDHVAVGIRGGAALKQPRLRRSARSDRATHLSVAAILVFLFLVLVVTVLVFSYISRDEISNNGGDSDDLKSDSDFLTNVPRIQRKKVLDFGHGSGGHGRDSRYWDRDDRRRDGDYGEDMMEQTSKDHGDENAEDDASVKTDHDSKSSQDGLQRRGDGLYNEAGRHELKRYEAEYEASLKNLGHSTEDDGKVSHDTDLEKKNAADDIDDEYDDFFDFHDAQMEDSGDSKNMKVKHSNSSVLSLDNEVQKQKEPNDSFDEENNDDVTSEDVEGTSSFNKKKSHDGKTNAKHANPSNGQSTRKSHPETKKKAKRRKFSGSCEMKLLNSTSQLVEPLESRKFSRFNLQYTETEEKPLGDEQWVPRFAGHQSLEERESSFLARDQQINCGFVKGPEGSQSTGFDLTEDDANYISRCHIAVISCIFGNSDRLRTPATKTVTRLSRKNVCFVMFTDEITIRTLSSEGHVPDRMGFIGFWKLVVVKNLPYDDMRRVGKIPKLLPHRLFPFARYSIWLDSKLRLQLDPLLILEYFLWRKGYEFAISNHYDRHCVWEEVARNKKLNKYNHTVIDEQFAFYRADGLEKFDASDPNKLLPSNVPEGSFIIRAHTPMSNLFSCLWFNEVDWFTPRDQLSFAYTYQKLRRMNPDKPFHLNMFKDCERRHIAKLFRHRLDEKRINRQKTTE* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1421 699 MobiDBLite consensus disorder prediction 244 337 - -
Gso20g1421 699 MobiDBLite consensus disorder prediction 110 180 - -
Gso20g1421 699 MobiDBLite consensus disorder prediction 110 173 - -
Gso20g1421 699 PANTHER ALKALINE CERAMIDASE-RELATED 19 698 IPR006852 -
Gso20g1421 699 MobiDBLite consensus disorder prediction 204 229 - -
Gso20g1421 699 MobiDBLite consensus disorder prediction 254 269 - -
Gso20g1421 699 PANTHER TRANSMEMBRANE PROTEIN (DUF616) 19 698 - -
Gso20g1421 699 Coils Coil 183 203 - -
Gso20g1421 699 MobiDBLite consensus disorder prediction 204 231 - -
Gso20g1421 699 Pfam Protein of unknown function (DUF616) 366 685 IPR006852 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1421 Gso-Chr20 44396311 44404226 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1421 - - gmx:100797815 1338.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1421 20 44396311 44404226 Gso10g1935 10 46303586 46311238 GST