Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1322 ATGGACACTGAAGGCTTATCCGTAATCTGCGCCGGCATCGGAACCATCGAAGTCGACGATGAAGGCAACGTAATCGGTTACATCAAAGGCCAATACTGTCTCGATAACCTGAAAGACCTTCTGCGCTTTCTTAGGCGCGACGATCCCCAAACGCGCGATGTCTTCAAGCAAGTCTGCAAATGGAACATCGTTTCCAAGTACTTAATCCCTACCATCGAGCTCTATCATGAAGATAGCAACTTGCTACTCAATGCAGTGAAGGTTCTGGTGTTCCTTACGATGCCGATCGAGCCTTCTTCCACGGATATATCCCAGCAGCTGGAGTATCTTTGGGGTTTGAAGTCTGCTTTGACTAACAGTGACGTTGCTGCAGTGATAGTGTCGTTTCTAGAGAGACCGCTCGAGAATTTGGAACGTGGCACGTTTAGTGAGGATGATTGGAAATTGGTACAGCTAGTGCTTACGTTATTTAGAAATATCCTAGCTGTTCAAGAGATTCCGACTCACCAGAAGTCAGGGGGACTTGCTACTCAGTTGTTATCAATGAGAGACCGGTTTCTGGAACTTTTGTTTCGGGAGAATGTAATGGATATAATGCTGGTTATATCTCAATGTGTTGGTAGTTCTAATGTTTATCTCCGTCAGGATAACTTGCTTCTACTGGAAATTTTTCATTACATTTTGATGGGTCAGGACCCGGAGTTAATTGTTAGGGCACATTTGAAGGAATCAAAGGAGGACGAACAACCCCAGACTTCTCTTAATAGTCTCCAGTTCATTTTGGAGGAGGAAAAGAAGAGAAGAAATATTTGTAAGCTCAACAATCTGAGTCGACATTCACAATTTAGTGGAACATTTGCTAGGCTTACCATGGATGGTTCTAAGGCAGTAATTAAGGGAAATCCTAATTCTTCTCACAATGTGCTGCTTAAAGCACAAAATGTCACCCGGGGTCCTACCAAAAGAACTGTGTGGGATCATCCAAGGTTGCCTTCAACAGAGGATAAGATATTGGAGCTGCTTCACGGATTTGTGAATCAGTTTCTTTCTGGGGGATACAATGTTTTGATGCGATCCATTCGTGAAGATATTGAAAAGGAACATCCCTCAATTCAAAAAAGTGATGTTGTTGTTTTCTTTCAAGTGGCTGAATTTGTCACTTCATTTCAGTGTTACAAGTATTCAGCTTCTAAGACCACGGAGGGAGGGGACACATTTGAGACTTTTAGTCATAAAGATGCAGATACCTCAGATTTCAGTGGTCAAATATGTGGTCCAATTGCAGCATCCTTGAATGAGTCAATGTTTCAATTGGTTATTTCAAAGTGGCGGCATGCCTATGATGGTCTAAAGGAAACAAATGACTATCAGTTTCTATCTGCAGCCGGTTCTCTTTTGAAAAACATGATTCGCATGCTGGATTTGATTCTTAAATTGTTGCCTGAAGACTCAAAGGAACCTCAAACAGCTCGCATACTTTTGTACAAGTTATTTTATGATCAGACTGAGGAAGGGATGACTCAGTTCCTATTGAATTTGATTAAAACCTTTGACACCCACAAACAACCCAAAAGTGATCTTTCAGATTTAGTGGAAATCATTCACAAGGTTGTAAAGCTGATGGATAATCTTCAGTCTCGAGGAGCATTGAGGGTGTCTAGAAAATCAAGGAAAGTGAAAAAAAAAATAATTCCAGAAGAGACAGAATCAGGGGACAAACTGGCTGGAGATCATTCTTTCATTCAAAATGAAACTGGCATCTCAACTGTCAATCAATCAGCAGAAAATCAGCCACTGCAGGAAGGCCTACCAAATGCAAATTCCACTGGGGAAGATGTTATCCCTAATGATAATGAACATGAAAATCATGTTGAGGAAGTTGGGAACTCCCAAGTTGGGTTAGAACCAATGGGAGCCACAAATTCTGAACATGTTAATGAGGATATGTTGGATGGTACTAAGGATTTTTCTGAAGATGAGCAACTACATGCATATAATGAAGTTGATTTCAAGGTTTCAACGCTGGTCTCTGCCTTTGCAAATCATAATATCATTCAGAAATTATGTTGGTTGCTCAAGTTTTACAAGAGCAATTCCCTGGCTACAAACCATTACATAATAAGCATGCTGCGGAGAATAAGTGATGACCTTGAACTCCATCCTATGCTTTACCAGTTGTCGCTGCTCACAACTTTTTATGACATCCTGGTTGAACAAAAGTCATGTCCCTGCAAGGACTATGCAGGTATAGTTGATTTTCTGACTTGTTTGGTCAGAAAGATGCTAAAGAAAATGAAAAAGCAACCCCTCTTGTTTGTGGAACTCCTTTTCTGGAAGACTCGGAGGGAATGCCATTACATCAATGCTGAATATTTGTTGAGCGAGCTTGGTCATTTGAAGAAAGAAAGTGCCAATTGGAATAACACTCAGGGAGATGAAGAAATTGGTTCATCCCCAGCAAAGGTGTGGACACGCAGAAGCATAGCTGATGCACTTGGTGAGGATGAAGCCGATGTTGTGATTACTCATGACTCAGGATATCAAAAAGACAAGCTTGATGATGTTATTAAAGGCTTTGCACCTACCTCTGGCAGTAACAGTGACAAAGATGATCATAATGGGGAGCAATTGATGGAAGATGAATCTCAAATTGCTCCAAGGAGAAGGAAGAAACTTGTTCTTGATGGTGATTTGGAAAGACAAATCAAAGATCTCCATGAGAAATTCAAAGATGACCAACATTGCAGTCACCGTATAGCTGAAGTGATAGATCCAGATGGTAAAATTTCACCAGCTCAAATTTCCAATATGTTAAAAAGGTTAGGACTAGCAGTTGCACCTAGGAGAAAGATGTGTGATGCTGATGCTGAAGGACCTTTGTCTACTAGCCCTAATCAGTTAGACAGTGACAAAATAACAGGAGCTACCAATCATAAATCCGTGAATTTGGAGGGAAGCCTGTTGGTTCAGCACCTGCAAAAAAAAAAGAGAGTCCAGGCTTTCAATAAAGATCAGGAAGCTCTAATCAAAGTTCTATATGAGCAATTCAAGGACCAAAGAAGATGTAGTTACATGATAGCCAATGCACTGGATAAGGATGGTAAATTCACTACTGCCCAAGTCTCTCGAAAACTTAAGCAGCTTGGTTTGTCTCTTCCTCTGAAGAGTTCTGGAGGAAAAATGCACCCAAAGGGTGCAGATCTCATGGATCGTTCAAATGAAAGGATGGATGAATCTGATGATGAGACATTGGTATCACTGGTAAAAAGGAAGAAAATGGAGAGTGACAAATTATCAAGGGGACAGTTACATGGACAAACCAGTGAGGATAAATTGTCAAAAGACAATTCTGATGATGAAATGCTCAGCTCTGTTCTCAAGAAAAAAATAAATAGCAAAGTATCAACTGAACAATTACTTGAACCCATTAATGTGGATTCATCGTCAAGAGATGATTCTGATGATGAAATGCTCAGCTCTGCTCTCAAAAGAACTAGACGACCATCTCTTAAATCAAAGCAAGTTGAGCTTGAAAATATCCAAATTCATGAGAGAATAATGGGCGACGATTCTTTCAATGGAGGCATAACAGAGGTTTCGGAAGGGGAATATCGTGTTGATTCCATGAATTCCTCTCAAGTAGAATATCAGCAAATGGATGACTTAGCAGATTTAGAGGATGAAGTGGCTGTTAGTGCAGTTCCTGACAATGCCAGATCCAGAAGGAAGCTGAGAATGGTGATTGATCCCGAGGACGATGACTGA 3765 0.4074 MDTEGLSVICAGIGTIEVDDEGNVIGYIKGQYCLDNLKDLLRFLRRDDPQTRDVFKQVCKWNIVSKYLIPTIELYHEDSNLLLNAVKVLVFLTMPIEPSSTDISQQLEYLWGLKSALTNSDVAAVIVSFLERPLENLERGTFSEDDWKLVQLVLTLFRNILAVQEIPTHQKSGGLATQLLSMRDRFLELLFRENVMDIMLVISQCVGSSNVYLRQDNLLLLEIFHYILMGQDPELIVRAHLKESKEDEQPQTSLNSLQFILEEEKKRRNICKLNNLSRHSQFSGTFARLTMDGSKAVIKGNPNSSHNVLLKAQNVTRGPTKRTVWDHPRLPSTEDKILELLHGFVNQFLSGGYNVLMRSIREDIEKEHPSIQKSDVVVFFQVAEFVTSFQCYKYSASKTTEGGDTFETFSHKDADTSDFSGQICGPIAASLNESMFQLVISKWRHAYDGLKETNDYQFLSAAGSLLKNMIRMLDLILKLLPEDSKEPQTARILLYKLFYDQTEEGMTQFLLNLIKTFDTHKQPKSDLSDLVEIIHKVVKLMDNLQSRGALRVSRKSRKVKKKIIPEETESGDKLAGDHSFIQNETGISTVNQSAENQPLQEGLPNANSTGEDVIPNDNEHENHVEEVGNSQVGLEPMGATNSEHVNEDMLDGTKDFSEDEQLHAYNEVDFKVSTLVSAFANHNIIQKLCWLLKFYKSNSLATNHYIISMLRRISDDLELHPMLYQLSLLTTFYDILVEQKSCPCKDYAGIVDFLTCLVRKMLKKMKKQPLLFVELLFWKTRRECHYINAEYLLSELGHLKKESANWNNTQGDEEIGSSPAKVWTRRSIADALGEDEADVVITHDSGYQKDKLDDVIKGFAPTSGSNSDKDDHNGEQLMEDESQIAPRRRKKLVLDGDLERQIKDLHEKFKDDQHCSHRIAEVIDPDGKISPAQISNMLKRLGLAVAPRRKMCDADAEGPLSTSPNQLDSDKITGATNHKSVNLEGSLLVQHLQKKKRVQAFNKDQEALIKVLYEQFKDQRRCSYMIANALDKDGKFTTAQVSRKLKQLGLSLPLKSSGGKMHPKGADLMDRSNERMDESDDETLVSLVKRKKMESDKLSRGQLHGQTSEDKLSKDNSDDEMLSSVLKKKINSKVSTEQLLEPINVDSSSRDDSDDEMLSSALKRTRRPSLKSKQVELENIQIHERIMGDDSFNGGITEVSEGEYRVDSMNSSQVEYQQMDDLADLEDEVAVSAVPDNARSRRKLRMVIDPEDDD* 1255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1322 1254 MobiDBLite consensus disorder prediction 1052 1120 - -
Gso20g1322 1254 Pfam Timeless protein 27 287 IPR006906 -
Gso20g1322 1254 MobiDBLite consensus disorder prediction 1141 1171 - -
Gso20g1322 1254 PANTHER PROTEIN TIMELESS HOMOLOG 1 1174 - -
Gso20g1322 1254 MobiDBLite consensus disorder prediction 1064 1120 - -
Gso20g1322 1254 MobiDBLite consensus disorder prediction 1147 1162 - -
Gso20g1322 1254 PANTHER TIMEOUT/TIMELESS-2 1 1174 IPR044998 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1322 Gso-Chr20 43252705 43262167 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1322 K03155 - gmx:100796385 2409.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1322 20 43252705 43262167 Gso20g1322 20 43252705 43262167 ECH
Gso20g1322 20 43252705 43262167 Gso10g2036 10 47378775 47386266 GST