Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1299 ATGACACGATCCTTGGTAATGGCTTCTTCATCAATGTCATGTCCGAAGCTGGGGAATTGTGCAGTGTCACATACAAAGTTCCAAGCTTTTCATCTCTCTTCAATGTTCTCTCCACTGGATCGAGGCCTTTTCTCACCTTGGAGTGGTTTAAAGCATCTGGGTATCTCAGCTAAACCAAAACCTCTTCTTCACATAGATAGAAAGGGAGGGTGTAAGGGTAAAGTGGTATATGCTTCTCTCTTTGGGGTTGGAGCTCCTGAGGCTTTGGTAATTGGGGTCGTTGCTTTGTTGGTTTTTGGCCCTAAAGGTCTTGCTGAGGTTGCTCGAAATCTGGGAAAAACATTGCGTGCATTTCAACCCACCATTAGAGAGCTTCAGGATGTTTCAAGGGAATTTAAGAGTACACTTGAGCGGGAGATTGGTCTTGATGACAATTTAAGTCCTACCCAGAACACATACAATTCCAATGTACGTAATACCACACCAACTTCATCATCCACTGTTGACCCCAATGGCACGCTAGACCCTACTAAAGCATACAGCTCTGAGGAGTATCTTAAGATTACAGAGGAGCAGCTGAAGGCATCTGCTGCACAACAGCAGGGGCAAACACCTCCCAAGGAAGGCGAGAATGGGCCTCAAATCCAGCCTCCTGCTGAGGAAACAGCTACTACAGTGCCTCCACCTCAGAAGCCAGAAAGTGAAACGTAA 711 0.4627 MTRSLVMASSSMSCPKLGNCAVSHTKFQAFHLSSMFSPLDRGLFSPWSGLKHLGISAKPKPLLHIDRKGGCKGKVVYASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKSTLEREIGLDDNLSPTQNTYNSNVRNTTPTSSSTVDPNGTLDPTKAYSSEEYLKITEEQLKASAAQQQGQTPPKEGENGPQIQPPAEETATTVPPPQKPESET* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1299 236 PANTHER SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATB, CHLOROPLASTIC 8 236 - -
Gso20g1299 236 MobiDBLite consensus disorder prediction 193 210 - -
Gso20g1299 236 PRINTS Bacterial sec-independent translocation TatB protein signature 80 100 - -
Gso20g1299 236 PRINTS Bacterial sec-independent translocation TatB protein signature 100 119 - -
Gso20g1299 236 Pfam mttA/Hcf106 family 83 133 IPR003369 GO:0015031
Gso20g1299 236 PANTHER SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATA, CHLOROPLASTIC 8 236 - -
Gso20g1299 236 MobiDBLite consensus disorder prediction 217 236 - -
Gso20g1299 236 Gene3D - 80 128 - -
Gso20g1299 236 MobiDBLite consensus disorder prediction 141 236 - -
Gso20g1299 236 MobiDBLite consensus disorder prediction 144 178 - -
Gso20g1299 236 TIGRFAM tatAE: twin arginine-targeting protein translocase, TatA/E family 82 127 IPR006312 GO:0016021|GO:0043953
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1299 Gso-Chr20 43013721 43018162 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1299 - - gmx:100799045 463.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1299 20 43013721 43018162 Gso10g2077 10 47743292 47747307 GST