Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1273 ATGGATTCAAGAGTAGTTCAAAGTGTAGTGCATGAGAACGATGAACATTACCCCCACATTGTTGCCTTAGAGCAAGTGACACACGGTGCAGAAGAAGACCACTTTGATCATGAGAAGAAGTCTGTTCTGAATAAGGTCAAGGCAAAGGCTAAGAAAATTAAGGACACGATTAAGAAGCATGGCCATCAAGTGCTTGATCGTGGTCATGAGTATAACAATGAAGATCAGCATACCCTTGATGATCATGACTTAGACGAGGATGATGAAATGGCTGAAGACCCACAAGTTCATAAAACACCAATTCATGAAAGTGAAGATGTTAAAACTGCAACACCTACATCTGAGCAAGTCGAAAATTTGGGGAAGTCAGGAATTGATTCTGGAGGCACAAGAGGTACAACAGTTATGGGAGAGGAACCCCGTCATGATGCACTACTTGGAGGTGTTTCTTCAACTACTGAAATTGATCAAAACATAGCCACTGACTCAGCCAAAACATTTTCTGTGGAAGAAAAGGCAGGGCCACCAAAGGACAATTTAGAGAAGTCAATAGGCTTGGACTTGGAGGAAGAGCCTCACGCTCCAGGAAGTAGACCTGAGGCATATCCCCCTACCAATTATCAAACCAAAATCACTGATCCAAGTGTGATAGGAAAGGATGAAATAGAAGAAATCACACCAGTTGAGGAATCTTTTGCAAAAATGAATATGCATGATGAGCCAAAACCTACTCCAGAACCAAATATCCAAGCAACTGTTGTTGATTCTGAATACCCTCCTGTTGGAAACCACGATCAGTTTGTGCCACACCTCTCTGCTGCAACACAAACTCAGTATCCTTCTGCTGAAAGTCATGATCAGTTCAATCAGGAAACAACATCCACAAATATCAACAGAAACCTGGTAAATCCCACAGAAACTGGACAAACTTTCAACACCATCACAACCACAATTGAAGAAAAACCACTCTATGAAGCAAAGACTGATGAAGTTATCTCTCCTAAAGATGTCATAGCTTCTGAGGCTGGTTCAGGAGAGAAAGATGCCATAAAGGACAAGGTGGTAACAAATAAAGAGCAACAAAAAATTGGGGATGCTTCTAACATGTCTGGCTCAACTGCACAACATGGAAAGAACATTGCTCACTCTCTGACTGAGAAATTAGCTCCAGTTTATGATAAGGTTGCAGTGGTAGGAAGTGCAGTGAAGTCCAAAGTGACTGGAACTAGCACTGGTGGTGTTGGAACTGAGACAAAGAATGAGGTTTCTGTGAAGGACTATTTGGCTGAGAAGCTAAAGCCTGGTGAAGAAGACAAGGCACTTTCTGAGTTAATTTCAGAAGCTTTACATAAGAAAAAGGAAGAGCCAGTGAAAAATGAGGATGGAAACTTGGATGACGGCAATGATAAAATGTGTGAAGAGTCCAGGGAAAGGTGTGGTTGGCAAGCTTAA 1452 0.4187 MDSRVVQSVVHENDEHYPHIVALEQVTHGAEEDHFDHEKKSVLNKVKAKAKKIKDTIKKHGHQVLDRGHEYNNEDQHTLDDHDLDEDDEMAEDPQVHKTPIHESEDVKTATPTSEQVENLGKSGIDSGGTRGTTVMGEEPRHDALLGGVSSTTEIDQNIATDSAKTFSVEEKAGPPKDNLEKSIGLDLEEEPHAPGSRPEAYPPTNYQTKITDPSVIGKDEIEEITPVEESFAKMNMHDEPKPTPEPNIQATVVDSEYPPVGNHDQFVPHLSAATQTQYPSAESHDQFNQETTSTNINRNLVNPTETGQTFNTITTTIEEKPLYEAKTDEVISPKDVIASEAGSGEKDAIKDKVVTNKEQQKIGDASNMSGSTAQHGKNIAHSLTEKLAPVYDKVAVVGSAVKSKVTGTSTGGVGTETKNEVSVKDYLAEKLKPGEEDKALSELISEALHKKKEEPVKNEDGNLDDGNDKMCEESRERCGWQA* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1273 483 PANTHER - 1 476 - -
Gso20g1273 483 MobiDBLite consensus disorder prediction 171 196 - -
Gso20g1273 483 MobiDBLite consensus disorder prediction 360 379 - -
Gso20g1273 483 MobiDBLite consensus disorder prediction 447 483 - -
Gso20g1273 483 MobiDBLite consensus disorder prediction 59 79 - -
Gso20g1273 483 MobiDBLite consensus disorder prediction 91 109 - -
Gso20g1273 483 MobiDBLite consensus disorder prediction 150 165 - -
Gso20g1273 483 MobiDBLite consensus disorder prediction 54 220 - -
Gso20g1273 483 MobiDBLite consensus disorder prediction 273 308 - -
Gso20g1273 483 MobiDBLite consensus disorder prediction 110 130 - -
Gso20g1273 483 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 1 476 IPR037491 GO:0009737
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1273 Gso-Chr20 42774760 42777802 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1273 - - gmx:100791989 872.078
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1273 20 42774760 42777802 Gso20g1273 20 42774760 42777802 ECH
Gso20g1273 20 42774760 42777802 Gso10g2104 10 48051855 48054815 GST