Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1272 ATGTTCAAGTCATGGAGCAAGAAGAACAAGATCAAAGCTCTATTCAAATTGGATTTTCAGGCAACTCAGGTGCCAAAGATGAAAAAGAATGCAATAATGGTGTCTTTGGTACCAGATGATGTTGGGAAGCCAACAGTGAAACTAGAGAAAACTGCTGTCCAAGATGGGACCTGCTCATGGGAGAATCCAGTTTTTGAATCAGTTAAACTTGTTAGGGATTCAAAATCAGGAAAAATTCATGAGAAAATCTACCATTTCATTGTTTCAACTGGGTCTTCAAAATCTGGCTTTCTTGGGGAAGCCTCAATTGATTTTGCGGATTTTGTTGCAGAAACCGAGCCAATGACTATTTCTCTACCTCTAAAGTTTGCCAATTCAGGCATAGTTTTACATGTGACTATTCAGAACGTCGAAGGATATGCTGCTGAAAGAAATGGGGAAGATAATGAAGCCGAGGGACTTTACAGTGAAGGAAGCTTGAAACACCAGCTGAGCTATGGCAGTACGGATCATGAAAGTTATAATGTTGATGAAAATGGGGACGCGGCAAGGACCAGATCTGAGTATTCCGAACAAGATGCATCCAATGGCATCAGTGCTGTGGCAGCTTCATGGGAGGATCCGTATAGCTTCAGACAAAATTCAATTCCATCAAGAGGAACTGTTAAGGCCATTGCAACTGAAACCCAAGTGCATAAGAGGTCAAACACAAACTGGTCAACTGGTTCAGCATCAGATGGAAGTTTAGGTGACTGGACTAACAGCCTGGAAGAGAGTATTCCAAGAGAAAGATTACAAGAGCCTTCGAATAATTCCACTGATAGCCTCCAAAGTGAAATTGCTTCTTTGAAGAGGCAGGCAGAAGTATCAGAAATAGAGTTGCAATCACTTCGAAGGCAGGTAGAAAAAGAAAGCAATAGGGGACAGAATTTGTCAAGACAAATAATCAGTCTCAGAGAGGAGAGAGATTTGCTCAAAACCAAGTATGAGCAACTCAAGTCTCAGCAGAATTTCAACAATGAGAGCAAAACCACAAAAACCTTGAAGTCTGAGATTGAAGATACAAGGCTTCAGTTAGAGGCAATAAAGGATGAGCTTGTTTATGAAAAAGATATGAAGGCCAATCTCCAATTGCAATTGCGGAAGACTCAAAACTCAAACTCTGAATTACTTTTGGCTGTGACAGACCTTGAAGCAATGCTGGAACAAAAGAATAATGAAATATTGGATCTGTCTACCAATATAAAATCCCAGAAGATTACTAAAGAGCATGATGATGCCACAGAATTAGATCTCTTAAGGCAAAAAATTGCAGACCAGGATGATGAAATAGACAATTACTACAAGCAACATGAAGAGCTAAGTGAGCAAATAAAAGAACTCACCTTAGAGTATGATCTTCTTAAGAAGGAAAATGTGGATATCTCTTTGAGGTTAAAGCAAGATGAAGCACAACACATCAAGTTACAGAATGAGCATTCGTCTTCTTTGGTTACAATACAACAACTTGAATCCCAAGTAGAGAGATTGGAAGAAAAGCTAAAGGTGCAGGAAGATGAATTTTCAGCATCTCTGCTCTGCATCAAGGAACTTGAAAATGAAGTCAAATCTTTGGAGAAAGAACTGAAACTACAGGCAGAGAAATTTGAAGAAGATCACCATGCTATGCAATGTGCAAAAACTGAGCAGGAACAACGGGTCATCCAAGCAGAAGAGGCCTTGAGAAAGACAAGACACAATAATGCTGTCGCATCTGAGCGTTTCCAGGAGGAATATAGATTGCTTTCTGTTGAAATGTCACAAAAAGTTGAGGAAAACGAAAAGATGACTATTAAAGCAGTTGCAGAAGCTGATGAATTGCGGCACCAGAATAAACTTATAGAAGAAATGCTCCATAAATGCAATGAGGAGCTCAGGCTTATCACAGATCAGAATGAATTGAAAATGAAAGAGCTTTTGAACCAAATGGATTCTAAAGCCGAAACAATAGAACAGATGTCGCAAGAACTAGAAGTTAAGTCGAAACAACTTGAGGATGCACAAAGGCAAAAGGATGAAAAGAATGCTTCATTTTCAAAGCAAATTCAAATGCTGGGATCTCAAATTAAGATGTTGATGGCAGATGGTTCATTGTCTGAAACGAAGCTAACAAAGAACACGACTGAGACCCAGAAAGGACAACGATTTATGACATCAAATGATGAGGAGAAGATGCTTGTAACCCTACTGTCGGAAGTAGAAACCTTTAAGAACCAGCACAATGAAATAAAACAAAGTTTGCGCAAAGAACAAGTGGAGAAAGAAAATATGAAGAAACAGATATCTCAATTAGAAGGAGAGCTGAAGAAGAAGGAAGCAGAGTTAAGTGCTATGGAAAAGAAGCTCAAGAATAACAAAGGACGTGTTGCAAATGAGAGTGCTGCGCCTCCTTCTGCTAAGGCACATATGAAGAAGTTAAAATCCGAAATGCATAAGGGAATGGATGCTGCAAACGCTGCTGTTAGCAAGTCTGAAGGAGGAACAGTTGGCAAATCAGCTGGAAGTGAGGGCCATGCAAATGAAATGTTGAATGAAGTTGCACAGCTAAAGGAAAGGAACAAGATTATGGAAAGCGAGCTGAAAGACATGGAAGAAAGATATTCAGAGATTAGTCTGAAATTTGCAGAGGTAGAGGGAGAAAGACAACAGCTTGTTATGGCTCTACGCAATCTCAAGAATGGTAAAAAGAACTAG 2733 0.3959 MFKSWSKKNKIKALFKLDFQATQVPKMKKNAIMVSLVPDDVGKPTVKLEKTAVQDGTCSWENPVFESVKLVRDSKSGKIHEKIYHFIVSTGSSKSGFLGEASIDFADFVAETEPMTISLPLKFANSGIVLHVTIQNVEGYAAERNGEDNEAEGLYSEGSLKHQLSYGSTDHESYNVDENGDAARTRSEYSEQDASNGISAVAASWEDPYSFRQNSIPSRGTVKAIATETQVHKRSNTNWSTGSASDGSLGDWTNSLEESIPRERLQEPSNNSTDSLQSEIASLKRQAEVSEIELQSLRRQVEKESNRGQNLSRQIISLREERDLLKTKYEQLKSQQNFNNESKTTKTLKSEIEDTRLQLEAIKDELVYEKDMKANLQLQLRKTQNSNSELLLAVTDLEAMLEQKNNEILDLSTNIKSQKITKEHDDATELDLLRQKIADQDDEIDNYYKQHEELSEQIKELTLEYDLLKKENVDISLRLKQDEAQHIKLQNEHSSSLVTIQQLESQVERLEEKLKVQEDEFSASLLCIKELENEVKSLEKELKLQAEKFEEDHHAMQCAKTEQEQRVIQAEEALRKTRHNNAVASERFQEEYRLLSVEMSQKVEENEKMTIKAVAEADELRHQNKLIEEMLHKCNEELRLITDQNELKMKELLNQMDSKAETIEQMSQELEVKSKQLEDAQRQKDEKNASFSKQIQMLGSQIKMLMADGSLSETKLTKNTTETQKGQRFMTSNDEEKMLVTLLSEVETFKNQHNEIKQSLRKEQVEKENMKKQISQLEGELKKKEAELSAMEKKLKNNKGRVANESAAPPSAKAHMKKLKSEMHKGMDAANAAVSKSEGGTVGKSAGSEGHANEMLNEVAQLKERNKIMESELKDMEERYSEISLKFAEVEGERQQLVMALRNLKNGKKN* 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1272 910 MobiDBLite consensus disorder prediction 265 281 - -
Gso20g1272 910 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 7 135 IPR019448 -
Gso20g1272 910 MobiDBLite consensus disorder prediction 233 281 - -
Gso20g1272 910 Coils Coil 560 580 - -
Gso20g1272 910 Coils Coil 746 801 - -
Gso20g1272 910 Coils Coil 852 893 - -
Gso20g1272 910 Coils Coil 493 548 - -
Gso20g1272 910 Coils Coil 617 637 - -
Gso20g1272 910 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 1 910 - -
Gso20g1272 910 PANTHER BNAC08G20130D PROTEIN 1 910 - -
Gso20g1272 910 Coils Coil 345 365 - -
Gso20g1272 910 Coils Coil 430 478 - -
Gso20g1272 910 Coils Coil 649 690 - -
Gso20g1272 910 MobiDBLite consensus disorder prediction 233 255 - -
Gso20g1272 910 Coils Coil 273 335 - -
Gso20g1272 910 Coils Coil 387 414 - -
Gso20g1272 910 ProSiteProfiles C2 NT-type domain profile. 3 138 IPR019448 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1272 Gso-Chr20 42766252 42773506 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1272 - - gmx:100782613 1729.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1272 20 42766252 42773506 Gso10g2105 10 48056059 48063467 GST
Gso16g1529 16 35630020 35635409 Gso20g1272 20 42766252 42773506 PCT
Gso9g1152 9 32994550 32995471 Gso20g1272 20 42766252 42773506 PCT