Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1246 ATGGCCTCCTTAAGCTGCCAGTTTCATTCCACCAGCTTGTTGAATTCTAAGAATGTCAACAGAAGGAGGAAACGTTTCATTTTTTGCTCAGCACAGCCTACACAAAACAATATTAAGGTTGTGATTAATGGAGCAACCAAGGAAATAGGAAGGGCAGCAGTAGTGGCAGTGACTAAGGCCAGAGGAATGGAGGTTGCAGGAGCGGTGGATACTTGTCATGTTGGGGAAGATATTGGAAAGATATGTGGCATGGAAGAGCCCCTTGAAATACCCATAATAAATGACCTTACTATGATTTTGGGCTCTATATCTCAGTCCAAGGCAGCAGGAGTTGTAGTTGATTTCACTGACCCTTCCTCTGTATATGACAACGTAAAACAGGCAACAGCATTTGGCATGAAAAGCGTAGTTTACGTGCCTCAAATCAAATTAGACACGGTAGCTGCATTATCTGCATTCTGCGACAAGGCCAGCATGGGCGTCTTGGTTGCACCAACCCTTTCCATAGGATCAATATTGTTGCAACAAGCTGCGATTTCAGCTTCTTTTCATTACAGCAACGTCGAAATCGTGGAATCTAGGGCTAATGCAAATGATCTTCCATCAGCAGATGCAAACCAAATTGCCAACAATCTCTCCAACCTGGGCCAAATCTATAACAGAGAAGACCCTTCAACAGATGTCTTGGCAAGGGGTCAAGTCCTAGGAGATGGAATTCGTGTACACAGCATGGTCCTTCCAGGCATTCCTTCTAGTACAACAGTTCACTTCTCTGGTCCAGGAGAGGTATACTCTATCAAGCATGATATCACAGATGTGAAGTGTCTCATGCCTGGCTTGCTATTAGCCATTAGAAAAGTAGTGCGCCTCAAGAATTTGGTATATGGCTTGGAGAAGTTTATATGA 906 0.4393 MASLSCQFHSTSLLNSKNVNRRRKRFIFCSAQPTQNNIKVVINGATKEIGRAAVVAVTKARGMEVAGAVDTCHVGEDIGKICGMEEPLEIPIINDLTMILGSISQSKAAGVVVDFTDPSSVYDNVKQATAFGMKSVVYVPQIKLDTVAALSAFCDKASMGVLVAPTLSIGSILLQQAAISASFHYSNVEIVESRANANDLPSADANQIANNLSNLGQIYNREDPSTDVLARGQVLGDGIRVHSMVLPGIPSSTTVHFSGPGEVYSIKHDITDVKCLMPGLLLAIRKVVRLKNLVYGLEKFI* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1246 301 PANTHER DIHYDRODIPICOLINATE REDUCTASE 1 301 IPR023940 GO:0008839|GO:0009089
Gso20g1246 301 PIRSF DHPR 36 301 IPR023940 GO:0008839|GO:0009089
Gso20g1246 301 Pfam Dihydrodipicolinate reductase, N-terminus 38 165 IPR000846 GO:0008839|GO:0009089
Gso20g1246 301 Pfam Dihydrodipicolinate reductase, C-terminus 174 300 IPR022663 GO:0008839|GO:0009089
Gso20g1246 301 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 168 272 - -
Gso20g1246 301 Gene3D - 37 194 - -
Gso20g1246 301 TIGRFAM dapB: 4-hydroxy-tetrahydrodipicolinate reductase 38 301 IPR023940 GO:0008839|GO:0009089
Gso20g1246 301 PANTHER DIHYDRODIPICOLINATE REDUCTASE-LIKE PROTEIN CRR1, CHLOROPLASTIC 1 301 - -
Gso20g1246 301 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 36 192 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1246 Gso-Chr20 42513820 42518142 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1246 K16908 - gmx:100782083 585.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1246 20 42513820 42518142 Gso10g2130 10 48302284 48305292 GST