Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1933 ATGGGGAGAGTGGTTTTGGGGGTGGCGGTGACGGTGGCGGTGGCGACGTGCGCGTTGGCGGCGGTGGTGGTGGGGCGGAGAGTGAGGAGCCGGAGGAAGTGGAAGAAAGTGGCGAATGTGGTGAGGGAACTGGAGGAAGGGTGTGCCACTAGGGTTGGGAGGTTGAGGCAAGTGGTGGATGCCATGGCCGTGGAGATGCACGCTGGTTTGGCTTCTGAAGGTGGCTCCAAGCTCAAAATGCTTCTCACATTCGTCGATAATCTCCCTAATGGGACCGAGAGAGGAACATATTATGCACTTCATCTTGGGGGTACCAATTTTAGGGTTTTGCGGGTTCAATTAAATGGTCAACCATCTTCAGACTTTGAACATGAAGTAGAACGACAACCCATTCCCCAACATGTAATGACTAGCACAAGCGAGGATCTCTTTGATTTTATTGCATCTTCATTGAAGGAATTCATTGCTAAAGAAGGAGATGGTTCCAATATTTCACAGGATAGAAGGGAGCTTGGATTTACATTCTCCTTTCCTGTGAAACAAATGTCTGTTTCTTCTGGCATTTTAATCAAATGGACAAAAGGGTTTTCCATCGGAAATATGGTAGGAAGAGATGTTGCAACATGTTTGCAAGAAGCATTGGCACGGAAAGGCCTAGATGTGCGGGTAGCTGCATTGGTTAATGACACTGTTGGAACATTAGCAGTTGGACATTATCATGATCCAGATACTGTTGCAGCAATTATAATTGGTACTGGTACAAATGCCTGCTATTTGGAACGAGTTGATGCTATTATCAAGTGTCAAGGCCTTCTTATGACATCCGGACGAATGGTTGTCAATATGGAATGGGGAAACTTTTGGTCATCTCACTTACCAAGAACATCATATGACATTGATTTGGATGCTGAGAGCCCTAATCCAAATGATCAGGGTTTTGAGAAAATGATATCAGGAATGTATCTTGGTGACATTGTGAGAAGAGTCATTCTTAAGATGTCATTAGAGTCGGATATGTTTGGACCAATTTCTCCCAAGCTTTCAATGCCTTTCATACTGTGGACTCCTTTGATGGCTGCCATGCATGAGGATAATTCTCCTGACTTGAGAGAAGTAGCAAGAATCCTTAATGACATATTTGAGATTCCTGATGTTCCCTTGAAGGCAAGAAAAATTGTGGTGAAGGTGTGTGATGTGGTGACTCGTAGAGCTGCTCGATTGGCAGCTGCTGGTATTGTTGGTATCTTGAAGAAGATTGGTAGGGACGGGAGTGGTGGTATCACAGGTGGACGGAGTAGAAGTGATATGAAAATGAGAAGAACAGTTGTGGCAATTGAAGGGGGATTGTATTCTAAATATACATTGTTTAGGGAGTACTTGCGTGAAGCTCTAAATGAAATATTGGGAGAAGATATTGCCAAGCACGTAATTCTAAAGGTCACCGAAGATGGATCCGGCATTGGGGCTGCACTGCTTGCTGCCTCTTATTCATCCTAA 1497 0.4469 MGRVVLGVAVTVAVATCALAAVVVGRRVRSRRKWKKVANVVRELEEGCATRVGRLRQVVDAMAVEMHAGLASEGGSKLKMLLTFVDNLPNGTERGTYYALHLGGTNFRVLRVQLNGQPSSDFEHEVERQPIPQHVMTSTSEDLFDFIASSLKEFIAKEGDGSNISQDRRELGFTFSFPVKQMSVSSGILIKWTKGFSIGNMVGRDVATCLQEALARKGLDVRVAALVNDTVGTLAVGHYHDPDTVAAIIIGTGTNACYLERVDAIIKCQGLLMTSGRMVVNMEWGNFWSSHLPRTSYDIDLDAESPNPNDQGFEKMISGMYLGDIVRRVILKMSLESDMFGPISPKLSMPFILWTPLMAAMHEDNSPDLREVARILNDIFEIPDVPLKARKIVVKVCDVVTRRAARLAAAGIVGILKKIGRDGSGGITGGRSRSDMKMRRTVVAIEGGLYSKYTLFREYLREALNEILGEDIAKHVILKVTEDGSGIGAALLAASYSS* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1933 498 SUPERFAMILY Actin-like ATPase domain 24 241 IPR043129 -
Gso1g1933 498 Gene3D - 83 493 - -
Gso1g1933 498 ProSitePatterns Hexokinase domain signature. 171 196 IPR019807 GO:0004396|GO:0005524|GO:0006096
Gso1g1933 498 PRINTS Hexokinase family signature 98 114 - -
Gso1g1933 498 PRINTS Hexokinase family signature 171 196 - -
Gso1g1933 498 PRINTS Hexokinase family signature 223 239 - -
Gso1g1933 498 PRINTS Hexokinase family signature 246 260 - -
Gso1g1933 498 PRINTS Hexokinase family signature 311 333 - -
Gso1g1933 498 PRINTS Hexokinase family signature 393 415 - -
Gso1g1933 498 CDD NBD_sugar-kinase_HSP70_actin 99 260 - -
Gso1g1933 498 Pfam Hexokinase 246 494 IPR022673 GO:0005524|GO:0005975|GO:0016773
Gso1g1933 498 Pfam Hexokinase 41 239 IPR022672 GO:0005524|GO:0005975|GO:0016773
Gso1g1933 498 Gene3D - 61 482 - -
Gso1g1933 498 ProSiteProfiles Hexokinase domain profile. 35 494 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Gso1g1933 498 SUPERFAMILY Actin-like ATPase domain 243 496 IPR043129 -
Gso1g1933 498 PANTHER HEXOKINASE 1 498 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Gso1g1933 498 PANTHER HEXOKINASE-3 1 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1933 Gso-Chr1 56017147 56022088 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1933 K00844 - gmx:100776994 894.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1933 1 56017147 56022088 Gso11g0812 11 7285676 7289752 GST