Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1929 ATGTTAGAGTTCAATGAATCAGGTAGCTCCAACAACAGTCTTGGTCAGAAACTTGCAAAACCCTCCTACTCAATTCCTGAAACAACTAGTTTAGAACAAATGTTTTGGCACGTTTTAGGCAATGGTAGTAATTTGGTGTGCAAACTGCAGCCTCCACAAGAGGTAAAGAAACTTAACCAGATTCCTGATGAGAAACTTCATCACAATTACGATGAATTTCGAGCGCAAGAAAAAACAAAGGGCATGAACTCTGCGCTTGTTAACATAACTCACAGGCTTGAATCTGATGGTTCTGTGTACAACTATGCCTCTGAGTCCAAAGGTGCAAAGGTGGTGGCCCATAATAAGGAGGCCAAAGGTGCAAAAAATATACTTGGGAAGGATCATGACAAGTACCTCAGAAACCCTTGTTCTGTTGAAGGAAAATTTGTTGTTATTGAGCTCTCAGAAGAGACCCTCGTTGATTCCGTGAAGATTGCAAACTTTGAGCATTATTCTTCCAACTTCAAGGAATTTGATTTGGCTGGAAGTTTGAACTATCCAACTGAAGAATGGAGCATGCTGGGAAACTTCATTGCTGCCAATGTCAAGCATGCACAGATCTTTAAGCTGCCTGAACCCAAATGGGCAAGGTATTTAAAGTTGAGCTTGATTAGTCATTATGGATCCGAGTTTTACTGCACACTGAGTGTTGTGGAAGTTTATGGGATCAATGCAATAGAGCGGATGCTTAAGGATCTAATTGTTGCTTCTGTGGCATCCATTCCTGATAAGTTGCCTGTTCATAATATCACTGACACCTCTTCATTGAAATCAGAAGATGGTCAAATTGACAGAAATGGAAAAAAAGTTGATACTAAGAATGATACTGTGGCTGCTGAGATAACAAGCAATGATACTGCTCGGGAGTTTGACGCAGAAGCGGTAAAAACAACAATGACTGCGAACTTGATTCCCGATCCTGTATTAGAACTTAGACAACAGCTAAAAGGTAGGGTAGCTGGTGACACTGTTCTGAAGATTTTGATGCAGAAAGTGAAGTCAGTGGAGGTAAACTTATCTTCCCTTGAGGATTACATCAAAGAATTGAACAGCAGACAACGGGTTAAAATACCAGATCTTGAGAAAGAGTTGTCCAGATTATCAGAAAGCCTAGGACAAAGCAAATCAGAGATCAAAGATCTCTGGCAGTGGAACACAAATATGGAAAAAGGAATATCTGAGGTTGAGTCTTGGAAAGATGCTGTCTCATCTCAACTTAATGAAATAGCCAGAGAAAATAGCATGCTAAGATCAGATGTTCGAAAGGTTGCAAGTAATCAAGTAAATATGGAAACCAAAGAACTTGCTGTATTAGCAACGAGTCTTGTTTTTGTGTGCCTTGCAGTTCTCAAGATAGTTTCAGTACATATGTTGACGTTTTCTGCATCATACAATGCAGATAAGATAGGCATTCTATAG 1461 0.3984 MLEFNESGSSNNSLGQKLAKPSYSIPETTSLEQMFWHVLGNGSNLVCKLQPPQEVKKLNQIPDEKLHHNYDEFRAQEKTKGMNSALVNITHRLESDGSVYNYASESKGAKVVAHNKEAKGAKNILGKDHDKYLRNPCSVEGKFVVIELSEETLVDSVKIANFEHYSSNFKEFDLAGSLNYPTEEWSMLGNFIAANVKHAQIFKLPEPKWARYLKLSLISHYGSEFYCTLSVVEVYGINAIERMLKDLIVASVASIPDKLPVHNITDTSSLKSEDGQIDRNGKKVDTKNDTVAAEITSNDTAREFDAEAVKTTMTANLIPDPVLELRQQLKGRVAGDTVLKILMQKVKSVEVNLSSLEDYIKELNSRQRVKIPDLEKELSRLSESLGQSKSEIKDLWQWNTNMEKGISEVESWKDAVSSQLNEIARENSMLRSDVRKVASNQVNMETKELAVLATSLVFVCLAVLKIVSVHMLTFSASYNADKIGIL* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1929 486 Pfam Sad1 / UNC-like C-terminal 114 236 IPR012919 -
Gso1g1929 486 Coils Coil 371 391 - -
Gso1g1929 486 PANTHER SUN DOMAIN-CONTAINING PROTEIN 5 2 478 - -
Gso1g1929 486 SUPERFAMILY Galactose-binding domain-like 138 235 IPR008979 -
Gso1g1929 486 PANTHER MEMBRANE PROTEIN CH1 RELATED 2 478 IPR045120 GO:0016020
Gso1g1929 486 Gene3D - 111 247 - -
Gso1g1929 486 Coils Coil 346 366 - -
Gso1g1929 486 ProSiteProfiles SUN domain profile. 79 239 IPR012919 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1929 Gso-Chr1 55973451 55975965 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1929 - - gmx:100788558 937.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1929 1 55973451 55975965 Gso1g1929 1 55973451 55975965 ECH