Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1928 ATGAGTGTGAGAGTTATTGTGTACCTTTTATCTACTGTACTAGTAGTATCTTCCACATTTGTAGAATCAAGAGCATTGCTTCAATTCCAAGATCCTTCTCCTCCCTCAACTGCACCTTCTTCTTCTCCTGTCCCTTTAGCGCCAGCGTTGTTCGTCATCGGAGACTCCTCCGTTGATTGCGGAACCAACAATTTTCTTGGCACCTTCGCACGCGCCGATCACCTTCCTTACGGAAAAGATTTCGACACCCACCAACCCACCGGAAGATTCTCCAATGGAAGGATCCCCGTCGATTATCTTGCTCTGCGTCTTGGGCTCCCTTTTGTGCCAAGTTATCTTGGGCAGACAGGGGCTGTGGAGGATATGATTCAAGGGGTAAACTACGCTTCTGCTGGCGCTGGCATTATTCTCTCTAGTGGCTCTGAATTGGGTCAGCACATCTCCCTCACTCAGCAAATTCAGCAATTTACAGACACACTTCAGCAGTTTATATTGAACATGGGCGAGGATGCTGCAACCAATCACATATCCAATTCTGTCTTTTATATTTCTATTGGAATCAACGACTACATTCATTACTATCTGCTCAATGTCTCTAACGTGGATAATTTGTACCTACCCTGGCATTTCAACCACTTTTTAGCATCTTCACTCAAGCAAGAGATAAAGAACTTGTACAATTTAAATGTTAGGAAAGTGGTGATCACGGGACTTGCTCCTATTGGCTGTGCCCCTCACTACTTGTGGCAGTACGGCAGTGGAAATGGAGAATGTGTTGAGCAGATAAATGACATGGCCGTTGAATTTAACTTTCTCACGAGGTACATGGTTGAAAATCTTGCTGAGGAGCTCCCGGGTGCCAATATCATCTTCTGTGATGTGTTAGAAGGTTCCATGGATATTTTAAAGAATCATGAACGTTATGGCTTTAACGTCACGAGCGATGCCTGCTGTGGATTGGGAAAGTACAAGGGCTGGATCATGTGCTTATCACCAGAAATGGCATGCAGTAATGCCTCCAACCATATCTGGTGGGACCAGTTTCATCCAACTGATGCAGTGAATGCCATTCTGGCCGACAATATATGGAATGGCCGGCACACTAAAATGTGCTATCCTATGAACTTGGAGGACATGGTAAATAGGATGGCAAGATGA 1158 0.4499 MSVRVIVYLLSTVLVVSSTFVESRALLQFQDPSPPSTAPSSSPVPLAPALFVIGDSSVDCGTNNFLGTFARADHLPYGKDFDTHQPTGRFSNGRIPVDYLALRLGLPFVPSYLGQTGAVEDMIQGVNYASAGAGIILSSGSELGQHISLTQQIQQFTDTLQQFILNMGEDAATNHISNSVFYISIGINDYIHYYLLNVSNVDNLYLPWHFNHFLASSLKQEIKNLYNLNVRKVVITGLAPIGCAPHYLWQYGSGNGECVEQINDMAVEFNFLTRYMVENLAEELPGANIIFCDVLEGSMDILKNHERYGFNVTSDACCGLGKYKGWIMCLSPEMACSNASNHIWWDQFHPTDAVNAILADNIWNGRHTKMCYPMNLEDMVNRMAR* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1928 385 Pfam GDSL-like Lipase/Acylhydrolase 50 361 IPR001087 GO:0016788
Gso1g1928 385 Gene3D SGNH hydrolase 45 368 IPR036514 -
Gso1g1928 385 PANTHER OS02G0290900 PROTEIN 38 381 - -
Gso1g1928 385 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 38 381 - -
Gso1g1928 385 CDD SGNH_plant_lipase_like 48 366 IPR035669 -
Gso1g1928 385 SUPERFAMILY SGNH hydrolase 49 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1928 Gso-Chr1 55970845 55973261 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1928 18 381 Acyl Lipid Metabolism Gene Families AT4G10950 68.767 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1928 - - gmx:100788021 749.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1928 1 55970845 55973261 Gso1g1928 1 55970845 55973261 ECH