Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1917 ATGGCACAGAAGAGATTCATCATCGAGGTCGAGAAGGCGAAGGAGGCGAGCGAAGGAAGGCCTTCGAGAGGACCTGTCTATCGTAGCCTCTTCGCCAAGGATGGATTCCCTGCTCCTATCCAAGGTCTCAATAGTTGCTGGGACGTTTTTCGATTGTCTGTTGAGAAATATCCATCAAATCCAATGCTTGGTCGCCGGGAAATTGTGGATGGGAAGCCGGGCAAGTACAAGTGGCTAACATACAAAGAAGTATATGACCAGGTGATGAAAGTTGGGAATTCTATCCGCAGCTGTGGTTATGGAGAAGGTGTAAAATGTGGTATTTACGGTGCTAATTCTGCAGAATGGATTATGAGCATGCAGGCTTGCAATGCTCATGGACTTTATTGTGTTCCTTTATATGATACCTTGGGTGCTGGGGCTATAGAGTTTATTATATGCCATGCAGAGGTCTCAATTGCATTTGCAGAAGAAAAGAAAATACCTGAGCTATTGAAGACATTTCCAAATGCAACAAAGTATCTCAAGACAATTGTAAGCTTCGGAAAGGTTACCCCTGAACAAAAGCAAGAAGTTGAAAATTCTGGGTTGGAAATATATTCATGGGATGAATTCTTACAAGTGGGTCAAAATCAGAGTTTTGATCTTCCTATTAAGAAAAGGAGTGACATCTGTACAATAATGTATACTAGTGGAACTACTGGTGACCCCAAGGGAGTGTTGATATCAAATGAGAGTATTATTACTCTCTTAGCTGGGGTTAAGCGACTGTTGGAGAGTGTAAATGAACAATTGACTGAGAAGGATGTATACATATCATACCTTCCACTTGCACATATATTTGATAGGGTCATTGAGGAGACATTCATATGGCATGGTGCTTCAATAGGTTTCTGGCGTGGGGATGTCAAATTGTTAATTGAAGATGTTGGCGAACTAAAACCAACTATTTTCTGTGCTGTTCCCCGTGTGCTTGATAGAGTGTACTCAGGTTTGACGCAGAAGATTTCTTCTGGGGGCTTCTTGAAGAAGACATTATTCAACTTTGCTTATTCATATAAGCTTAATAACATGAAGAAAGGGCTTAGACATGGAGAAGCATCTCCACTTCTTGATAAAATTGTGTTTGACAAGGTAAAGCAAGGTTTAGGGGGTAGAGTACGTCTTATTTTGTCTGGAGCAGCACCTTTATCTGCACATGTGGAAGGTTACTTACGGGTGGTGACTTGTGCTCATGTCCTACAGGGATATGGTCTGACTGAAACCTGTGCGGGAACCTTTGTCTCATTACCAAATGAAATAGAAATGCTTGGAACAGTGGGCCCTCCTGTACCAAATGTGGATGTTTGCCTGGAATCTGTTCCTGAAATGGGATACGATGCCCTAGCAAGTACACCAAGAGGAGAAATTTGTGTAAAGGGAAAAACCTTGTTTGCAGGGTACTACAAACGTGAAGACCTCACTAAAGAGGTTCTGATTGATGAATGGTTCCATACAGGGGATATTGGAGAGTGGCAACCTAATGGAAGCATGAAAATTATTGATCGGAAGAAGAATATATTTAAGCTTTCACAAGGAGAATATGTTGCTGTCGAAAACCTGGAGAATATTTACGGTCAAGTTTCTTCTATTGAATCTATATGGGTTTATGGAAACAGTTTTGAGGCCTTCCTTGTGGCTGTTGTTAACCCCAGTAAGCAAGCACTTGAACATTGGGCCCAAGAAAATGGTATATCCATGGACTTCAATTCTCTCTGTGAAGATGCTCGAGCAAAAAGTTACATAATTGAAGAGCTCTCAAAGATTGCGAAGGAAAAGAAGTTGAAAGGTTTTGAGTTTATAAAAGCAGTTCACCTTGACTCAATTCCATTTGACATGGAACGTGACCTTATCACTCCAACATACAAGAAGAAGAGGCCACAGTTGCTTAAATACTATCAGAATGCCATTGACAACATGTATAAGAGTGGAAGTAAACCCAGTGCCTGA 1989 0.4123 MAQKRFIIEVEKAKEASEGRPSRGPVYRSLFAKDGFPAPIQGLNSCWDVFRLSVEKYPSNPMLGRREIVDGKPGKYKWLTYKEVYDQVMKVGNSIRSCGYGEGVKCGIYGANSAEWIMSMQACNAHGLYCVPLYDTLGAGAIEFIICHAEVSIAFAEEKKIPELLKTFPNATKYLKTIVSFGKVTPEQKQEVENSGLEIYSWDEFLQVGQNQSFDLPIKKRSDICTIMYTSGTTGDPKGVLISNESIITLLAGVKRLLESVNEQLTEKDVYISYLPLAHIFDRVIEETFIWHGASIGFWRGDVKLLIEDVGELKPTIFCAVPRVLDRVYSGLTQKISSGGFLKKTLFNFAYSYKLNNMKKGLRHGEASPLLDKIVFDKVKQGLGGRVRLILSGAAPLSAHVEGYLRVVTCAHVLQGYGLTETCAGTFVSLPNEIEMLGTVGPPVPNVDVCLESVPEMGYDALASTPRGEICVKGKTLFAGYYKREDLTKEVLIDEWFHTGDIGEWQPNGSMKIIDRKKNIFKLSQGEYVAVENLENIYGQVSSIESIWVYGNSFEAFLVAVVNPSKQALEHWAQENGISMDFNSLCEDARAKSYIIEELSKIAKEKKLKGFEFIKAVHLDSIPFDMERDLITPTYKKKRPQLLKYYQNAIDNMYKSGSKPSA* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1917 662 Gene3D - 42 516 IPR042099 -
Gso1g1917 662 ProSitePatterns Putative AMP-binding domain signature. 227 238 IPR020845 -
Gso1g1917 662 Pfam AMP-binding enzyme 57 524 IPR000873 -
Gso1g1917 662 SUPERFAMILY Acetyl-CoA synthetase-like 42 655 - -
Gso1g1917 662 PANTHER LONG CHAIN ACYL-COA SYNTHETASE 3 254 656 - -
Gso1g1917 662 PANTHER LONG CHAIN ACYL-COA SYNTHETASE 3 3 52 - -
Gso1g1917 662 PANTHER LONG CHAIN ACYL-COA SYNTHETASE 3 52 252 - -
Gso1g1917 662 CDD LC-FACS_euk 74 655 IPR045311 GO:0004467|GO:0006631
Gso1g1917 662 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 52 252 - -
Gso1g1917 662 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 254 656 - -
Gso1g1917 662 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 3 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1917 Gso-Chr1 55887784 55896469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1917 3 656 Acyl Lipid Metabolism Gene Families AT4G23850 75.688 0.0 1070
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1917 K01897 - gmx:100814965 1340.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1917 1 55887784 55896469 Gso1g1917 1 55887784 55896469 ECH