Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1910 ATGGCCTTCCCGGAGAAGGACGCCGGAGCTAATTTTGTCCTCCAATCCAAAGGTGAATGGTGGCACGCGGGTTTCCATTTAACGACGGCGATCGTGGGTCCCACCATACTGACGCTACCGTATGCGTTGAGAGGGTTGGGGTGGGGGTTGGGTCTGTTTTGCCTAACGGCGATGGGACTGGTCACGTTCTACTCTTACTACCTTATGTCCAAGGTGCTTTATCACTGTGAGAATGCCGGTCGCCGCCACATCCGCTTTCGTGAACTCGCCGCTCACGTCTTCGGGTCGGGATGGATGTACTATTTTGTAATCTTAATACAAACAGCAATCAACTGTGGGGTTGGCGTAGGAGCAATCTTACTTGCGGGCCAATGCCTTCAGATCCTGTATACCAGTATTTCACCACACGGATCCCTGAAATTGTACGAGTTTATAGCAATGGTGACAGTGATAATGATAGTTCTATCTCAGCTTCCCTCTTTCCATTCCCTGAGACACATCAACTTGTGTTCGCTATTTCTCAGCCTGGGCTACACAGCTCTTGTGGTTGGTGCCTGCATTCATGCAGGTACATCGGAGAACGTCCCTCCAAGGGACTATTCCTTAGAACCTAAGATGTCATCAAGAGCTTTCAGCGCATTCACTTCCATCTCCATACTTGCAGCAATATTTGGGAATGGCATATTACCTGAGATACAAGCAACTCTAGCGCCTCCTGCTGCTGGGAAGATGGTAAAAGGCCTTGTAATGTGCTATGCTGTAATTGGAGTGACATTCTACTCAGCTGCAGTTTCTGGATATTGGATATTTGGAAACAAGTCTAGTTCAAACATTTTCAACAGTCTGATGCCAGATGATGGACCTTCTTTGGCTCCAACTTGGGTCCTTGGCCTTGCAGTTATTTTTGTTCTTCTCCAGCTCTTTGCCATTGGCCTGGTTTATTCTCAAGTGGCTTATGAGATAATGGAGAAGAAGTCAGCTGATGTGAATCAGGGGATGTTTTCCAAAAGAAATCTTATTCCACGCATAATTCTTCGATCAATTTACATGATACTATGTGGGTATGTGGCAGCTATGCTGCCATTTTTTGGAGACATCAACGGTGTGGTTGGTGCCATTGGTTTCATCCCTTTGGATTTCGTTCTGCCTATGCTTATGTACAACATGACATACAAGCCTCCAAAATCATCCTTCACTTATTGGATTAACACCTCAATTATGGTGGTCTTCACGGGTGTTGGAATAATGGGCGCATTCTCTTCTATAAGGAAATTGGTTCTTGATGCCCACCAATTTAAGCTCTTTAGCGATGATGTTGTTGATTAA 1326 0.457 MAFPEKDAGANFVLQSKGEWWHAGFHLTTAIVGPTILTLPYALRGLGWGLGLFCLTAMGLVTFYSYYLMSKVLYHCENAGRRHIRFRELAAHVFGSGWMYYFVILIQTAINCGVGVGAILLAGQCLQILYTSISPHGSLKLYEFIAMVTVIMIVLSQLPSFHSLRHINLCSLFLSLGYTALVVGACIHAGTSENVPPRDYSLEPKMSSRAFSAFTSISILAAIFGNGILPEIQATLAPPAAGKMVKGLVMCYAVIGVTFYSAAVSGYWIFGNKSSSNIFNSLMPDDGPSLAPTWVLGLAVIFVLLQLFAIGLVYSQVAYEIMEKKSADVNQGMFSKRNLIPRIILRSIYMILCGYVAAMLPFFGDINGVVGAIGFIPLDFVLPMLMYNMTYKPPKSSFTYWINTSIMVVFTGVGIMGAFSSIRKLVLDAHQFKLFSDDVVD* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1910 441 PANTHER OS05G0424000 PROTEIN-RELATED 10 433 - -
Gso1g1910 441 PANTHER GABA TRANSPORTER 2 ISOFORM X1-RELATED 10 433 - -
Gso1g1910 441 Pfam Transmembrane amino acid transporter protein 17 425 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1910 Gso-Chr1 55825765 55831026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1910 5 441 Organic Solute Cotransporters AT5G41800 78.719 0.0 713
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1910 - - gmx:100812284 885.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1910 1 55825765 55831026 Gso1g1910 1 55825765 55831026 ECH