Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1908 ATGTCTTCGTCGAAAGATGCAGACCCAAGCCTGGGTTACCTGACTCGCAAGGACACGGAGGTGAAGCTTCCGCGTCCAACCAGGGTCAAGAACAAAACCCCCGCTCCCATTCAAATCACCGCCGAGCAGATTCTCCGCGAGGCACGTGAGCGTCAAGAGGCCGAGATCCGCCCTCCCAAGCAGAAGATCACCGACCCCACCGAGCTCGGTGAGTACCGTCTCCGCAAGCGCAAGGAGTTCGAAGACTTAATCCGCCGCGTTCGATGGAACATCGGCGTCTGGATCAAGTACGCGCAGTGGGAGGAATCGCAGAAGGACTTCAAACGCGCGCGTTCCGTCTGGGAGAGAGCGTTGGAGGTGGATTACAAGAACCACACCCTGTGGCTCAAATACGCTGAGGTGGAGATGAAGAACAAGTTCATAAACCACGCAAGGAACGTCTGGGACCGCGCCGTGACGCTTCTGCCCAGGGTGGATCAGTTATGGTACAAGTACATTCACATGGAGGAGATGCTTGGCAATGTCGCCGGCGCCAGGCAGGTTTTCGAGCGGTGGATGAAGTGGACCCCAGACCAGCAGGGGTGGCTCTCTTACATCAAGTTTGAATTGAGGTACAATGAAATTGAGCGCGCCAGAGGGATTTTCGAGCGGTTTGTTGAGTGCCACCCTAGGGTTGGGGCTTGGATTCGCTATGCCAAGTTTGAGATGAAGAATGGCGAGGTTGTGAGGTCGAGGAACGTGTACGAGAGAGCCGTGGATAAGCTCTCCGACGATGAGGAAGCGGAGCAGTTATTTGTTGCTTTTGCTGAGTTTGAGGAAAGGTGTAAGGAGACTGAGCGTGCAAGGGCCATATATAAGTTTGCTCTTGATCATATTCCCAAGGGAAGGGCGGAAGATTTGTATCGTAAGTTTGTGGCATTTGAGAAGCAGTATGGGGACAGGGAAGGGATTGAGGATGCTATTGTTGGGAAGAGAAGGTTTCAGTATGAGGATGAAGTGAAGAAGAATCCGTTGAATTATGATTCCTGGTTCGATTACATAAGGTTGGAAGAAAGTGTGGGGGATAAGGAGAGAATCAGGGAGGTTTATGAGAGGGCAATAGCCAATGTTCCTCCGGCTGAGGAAAAGCGCTATTGGCAGCGCTATATCTATTTGTGGATTAATTATGCACTCTATGAAGAGCTTGATGCTGGAGACATGGAACGAACAAGGGATGTATACAAGGAGTGTCTCAACCAGATACCTCACCAAAAGTTTTCGTTTGCAAAGATATGGCTTCTAGCAGCCCAGTTTGAAATACGTCAGCTGAATCTCAGGGCTGCCCGTCAAATATTAGGAAATGCCATTGGAAAGGCTCCTAAAGATAAGATTTTTAAGAAGTATATAGAGATAGAACTGCAGCTTGGTAATATAGATCGATGCAGAAAGCTGTATGAAAAATATCTGGAGTGGTCGCCTGAAAATTGTTATGCTTGGAGCAAGTATGCAGAACTGGAGAGATCTTTATCTGAGACTGATCGAGCTAGAGCAATTTTTGAGCTTGCAATTGCTCAACCAGCATTGGACATGCCTGAACTGTTGTGGAAGGCATACATTAACTTTGAGACTGCTGAGGGTGAATTTGAGAGAGCAAGGGCACTTTATGAAAGGCTTCTTGATCGAACAAAGCACTTGAAGGTATGGATAAGCTATGCGGAATTTGAGGCAACAGCTATGGCTATGGACAATTTAGACTTAACAGAAGAAGAACAAAAGAAGCAATGCATTCAGAGTGCTAGAAGGGTGTTTGAGAAAGCTCTTAACTACTTCAGATCATCAGCTCCAGATTTGAAAGAAGAAAGGGCAATGCTATTGGAGAAATGGCTCAACATGGAGGCTACGTCTGGAGAGTTGGGTGATGTTAGCTTAGTCCAGTCTAAACTGCCCAAGAAGCTCAAGAAGAGAAGGCATGTTGCCACTGAAGATGGTTCTACTAGAATTGAAGAATTCATCGACTATTTATTCCCTGAGGAAAGCCAGACAACCAATCTCAAGATCTTGGAAGCTGCTTACAAATGGAAGAAGCAAAAATTGTCTTCTGATGATTAA 2088 0.4732 MSSSKDADPSLGYLTRKDTEVKLPRPTRVKNKTPAPIQITAEQILREARERQEAEIRPPKQKITDPTELGEYRLRKRKEFEDLIRRVRWNIGVWIKYAQWEESQKDFKRARSVWERALEVDYKNHTLWLKYAEVEMKNKFINHARNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQVFERWMKWTPDQQGWLSYIKFELRYNEIERARGIFERFVECHPRVGAWIRYAKFEMKNGEVVRSRNVYERAVDKLSDDEEAEQLFVAFAEFEERCKETERARAIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQYEDEVKKNPLNYDSWFDYIRLEESVGDKERIREVYERAIANVPPAEEKRYWQRYIYLWINYALYEELDAGDMERTRDVYKECLNQIPHQKFSFAKIWLLAAQFEIRQLNLRAARQILGNAIGKAPKDKIFKKYIEIELQLGNIDRCRKLYEKYLEWSPENCYAWSKYAELERSLSETDRARAIFELAIAQPALDMPELLWKAYINFETAEGEFERARALYERLLDRTKHLKVWISYAEFEATAMAMDNLDLTEEEQKKQCIQSARRVFEKALNYFRSSAPDLKEERAMLLEKWLNMEATSGELGDVSLVQSKLPKKLKKRRHVATEDGSTRIEEFIDYLFPEESQTTNLKILEAAYKWKKQKLSSDD* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1908 695 SUPERFAMILY TPR-like 526 628 IPR011990 GO:0005515
Gso1g1908 695 MobiDBLite consensus disorder prediction 1 36 - -
Gso1g1908 695 Coils Coil 534 554 - -
Gso1g1908 695 Pfam HAT (Half-A-TPR) repeat 207 235 IPR003107 GO:0006396
Gso1g1908 695 SMART hat_new_1 436 467 IPR003107 GO:0006396
Gso1g1908 695 SMART hat_new_1 139 171 IPR003107 GO:0006396
Gso1g1908 695 SMART hat_new_1 398 434 IPR003107 GO:0006396
Gso1g1908 695 SMART hat_new_1 469 501 IPR003107 GO:0006396
Gso1g1908 695 SMART hat_new_1 539 570 IPR003107 GO:0006396
Gso1g1908 695 SMART hat_new_1 320 352 IPR003107 GO:0006396
Gso1g1908 695 SMART hat_new_1 239 274 IPR003107 GO:0006396
Gso1g1908 695 SMART hat_new_1 173 204 IPR003107 GO:0006396
Gso1g1908 695 SMART hat_new_1 206 237 IPR003107 GO:0006396
Gso1g1908 695 SMART hat_new_1 71 103 IPR003107 GO:0006396
Gso1g1908 695 SMART hat_new_1 276 310 IPR003107 GO:0006396
Gso1g1908 695 SMART hat_new_1 587 620 IPR003107 GO:0006396
Gso1g1908 695 SMART hat_new_1 503 537 IPR003107 GO:0006396
Gso1g1908 695 SMART hat_new_1 105 137 IPR003107 GO:0006396
Gso1g1908 695 SMART hat_new_1 354 388 IPR003107 GO:0006396
Gso1g1908 695 SUPERFAMILY TPR-like 268 523 IPR011990 GO:0005515
Gso1g1908 695 PANTHER PRE-MRNA SPLICING FACTOR 22 695 IPR045075 GO:0000398
Gso1g1908 695 SUPERFAMILY TPR-like 81 205 IPR011990 GO:0005515
Gso1g1908 695 PANTHER - 22 695 - -
Gso1g1908 695 MobiDBLite consensus disorder prediction 11 27 - -
Gso1g1908 695 Gene3D Tetratricopeptide repeat domain 323 521 IPR011990 GO:0005515
Gso1g1908 695 Gene3D Tetratricopeptide repeat domain 122 322 IPR011990 GO:0005515
Gso1g1908 695 Gene3D Tetratricopeptide repeat domain 522 630 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1908 Gso-Chr1 55815881 55820880 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1908 K12869 - gmx:100811745 1397.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1908 1 55815881 55820880 Gso1g1908 1 55815881 55820880 ECH