Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1900 ATGCACTCTCACTCACACCCACATACCTTGCCACGCCCACATTCACTACTCCCTTCTTCTTTTCTTCTTCTTCTTCCTCCTTCCTCTCTCCGCATCTCCAACACTAAGAGGCTGCAATCCTCAACTTTCGCCCTCTCCCAAAATGAAACAAAATTCCCAACGCAGCCTTACAAGAATTCCAACAATTCGCCTCAATCACTTGCTCACATCTCCAATTGCAAATTCCCCTTGGCTCGGCCCCTTGTTTCTTCTTCTCATCCCCCTAGTACTAATTCATCCACCAAGCTTCTCAACTCTATGCTGCTCTTCGCCTTCCTCACACTTCAACCCTCTTATCCTGCACTTGCTGCTTCTTCTGACTTCTCCACTATATTTGGGGATATTGGTGACTTAAGCACAGGTTTTGCTTCAGCGTTTCTGCTAATATTTTTCTCTGAACTGGGAGACAAGACCTTTTTCATTGCAGCGCTACTAGCAGCTAGGAACTCAGCTGGTGTTGTTTTTATTGGAACATTTGGCGCACTTGCGGCAATGACTCTGATATCTGTTGTCCTTGGACGAACCTTTCATTATGTTGATGAAATCTTGCCATTCAGGTTTGGAGAAACTGATTTACCCATTGATGATATTGCTGCTGTTTGCCTATTGGTGTACTTTGGGGTCTCTACCCTGCTGGATGCCTCATCTAGCGATGGCCAAAAATCAGATGAAGAGCAGAAGGAGGCAGAACTAGCAGTTTCTGAATTTTCTGGAAATGGTGCTGGGATACTATCTGCTGCTAGCACAGTTGCCAGTACTTTTCTCTTAGTTTTTGTTGCTGAATGGGGCGACAAGTCATTTTTCTCCACAATTGCCCTTGCAGCAGCTTCTTCTCCCCTTGGAGTCATAGCTGGAGCACTGGCTGGTCATGGTGTTGCAACTTTGCTAGCTGTACTTGGGGGTTCTTTACTTGGGACGTATTTGTCAGAGAAGGTTATTGCCTACATCGGAGGTGTTCTCTTTCTCGTCTTTGCCGCAATAACCTTATTTGAAATTGTGCAATAG 1044 0.454 MHSHSHPHTLPRPHSLLPSSFLLLLPPSSLRISNTKRLQSSTFALSQNETKFPTQPYKNSNNSPQSLAHISNCKFPLARPLVSSSHPPSTNSSTKLLNSMLLFAFLTLQPSYPALAASSDFSTIFGDIGDLSTGFASAFLLIFFSELGDKTFFIAALLAARNSAGVVFIGTFGALAAMTLISVVLGRTFHYVDEILPFRFGETDLPIDDIAAVCLLVYFGVSTLLDASSSDGQKSDEEQKEAELAVSEFSGNGAGILSAASTVASTFLLVFVAEWGDKSFFSTIALAAASSPLGVIAGALAGHGVATLLAVLGGSLLGTYLSEKVIAYIGGVLFLVFAAITLFEIVQ* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1900 347 ProSitePatterns Uncharacterized protein family UPF0016 signature. 146 155 IPR001727 -
Gso1g1900 347 PANTHER TRANSMEMBRANE PROTEIN HTP-1 RELATED 48 347 IPR001727 -
Gso1g1900 347 Pfam Uncharacterized protein family UPF0016 137 220 IPR001727 -
Gso1g1900 347 Pfam Uncharacterized protein family UPF0016 265 338 IPR001727 -
Gso1g1900 347 PANTHER PROTEIN PAM71, CHLOROPLASTIC 48 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1900 Gso-Chr1 55718367 55723054 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1900 - - gmx:100809618 609.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1900 1 55718367 55723054 Gso1g1900 1 55718367 55723054 ECH